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    Medag mesenteric estrogen-dependent adipogenesis [ Rattus norvegicus (Norway rat) ]

    Gene ID: 360757, updated on 27-Nov-2024

    Summary

    Official Symbol
    Medagprovided by RGD
    Official Full Name
    mesenteric estrogen-dependent adipogenesisprovided by RGD
    Primary source
    RGD:1307396
    See related
    EnsemblRapid:ENSRNOG00000000906 AllianceGenome:RGD:1307396
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    RGD1307396
    Summary
    Predicted to be involved in positive regulation of fat cell differentiation. Predicted to be active in cytoplasm. Orthologous to human MEDAG (mesenteric estrogen dependent adipogenesis). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Biased expression in Heart (RPKM 94.9), Adrenal (RPKM 94.3) and 7 other tissues See more
    Orthologs
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    Genomic context

    See Medag in Genome Data Viewer
    Location:
    12p11
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 12 NC_086030.1 (10649526..10670913, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 12 NC_051347.1 (5613191..5634583, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 12 NC_005111.4 (6711745..6730959, complement)

    Chromosome 12 - NC_086030.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134481257 Neighboring gene WD40 repeat domain 95 like Neighboring gene testis expressed 26 Neighboring gene uncharacterized LOC102551556 Neighboring gene ribosomal protein L28, pseudogene 11

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    General protein information

    Preferred Names
    mesenteric estrogen-dependent adipogenesis protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001398808.1NP_001385737.1  mesenteric estrogen-dependent adipogenesis protein isoform 1

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000012
      UniProtKB/TrEMBL
      D3ZTT1
      Related
      ENSRNOP00000103199.1, ENSRNOT00000156087.1
    2. NM_001398809.1NP_001385738.1  mesenteric estrogen-dependent adipogenesis protein isoform 2

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000012
      UniProtKB/TrEMBL
      A6K165
      Related
      ENSRNOP00000001205.6, ENSRNOT00000001205.9

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086030.1 Reference GRCr8

      Range
      10649526..10670913 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)