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    RpL7A Ribosomal protein L7A [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 31588, updated on 9-Dec-2024

    Summary

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    Official Symbol
    RpL7Aprovided by FlyBase
    Official Full Name
    Ribosomal protein L7Aprovided by FlyBase
    Primary source
    FLYBASE:FBgn0014026
    Locus tag
    Dmel_CG3314
    See related
    AllianceGenome:FB:FBgn0014026
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG3314; Dmel\CG3314; L7a; L7A; L8e; Rp L7A; RpL7a; RPL7a; Surf-3/rpL7a; Surf3/rpL7a
    Summary
    A structural constituent of ribosome. Predicted to be involved in maturation of LSU-rRNA. Located in cytosolic ribosome. Is expressed in adult head and adult heart. Orthologous to human RPL7A (ribosomal protein L7a). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See RpL7A in Genome Data Viewer
    Location:
    6B1-6B1; 1-17 cM
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (6530897..6533348, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (6424930..6427381, complement)

    Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene Alanine-glyoxylate aminotransferase Neighboring gene deltex Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The genomic organization of the region containing the Drosophila melanogaster rpL7a (Surf-3) gene differs from those of the mammalian and avian Surfeit loci. Armes N, et al. Mol Cell Biol, 1995 May. PMID 7739520, Free PMC Article
    2. A member of the Notch group of interacting loci, deltex encodes a cytoplasmic basic protein. Busseau I, et al. Genetics, 1994 Feb. PMID 8150285, Free PMC Article
    3. Drosophila PS2 and PS3 integrins play distinct roles in retinal photoreceptors-glia interactions. Tavares L, et al. Glia, 2015 Jul. PMID 25731761
    4. Drosophila Ecp is a novel ribosome associated protein interacting with dRPL5. Wang D, et al. Biochim Biophys Acta, 2006 Sep. PMID 16870348
    5. Profiling patterned transcripts in Drosophila embryos. Simin K, et al. Genome Res, 2002 Jul. PMID 12097340, Free PMC Article

    See all (69) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables RNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables structural constituent of ribosome HDA PubMed 
    enables structural constituent of ribosome IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables structural constituent of ribosome TAS
    Traceable Author Statement
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cytoplasmic translation IC
    Inferred by Curator
    more info
    		 PubMed 
    involved_in cytoplasmic translation TAS
    Traceable Author Statement
    more info
    		 PubMed 
    involved_in maturation of LSU-rRNA IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in ribosome biogenesis IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    part_of cytosolic large ribosomal subunit IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    part_of cytosolic large ribosomal subunit TAS
    Traceable Author Statement
    more info
    		 PubMed 
    located_in cytosolic ribosome HDA PubMed 
    located_in cytosolic ribosome IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    part_of ribonucleoprotein complex IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    ribosomal protein L7A
    Names
    CG3314-PA
    CG3314-PD
    CG3314-PE
    CG3314-PF
    CG3314-PG
    RpL7A-PA
    RpL7A-PD
    RpL7A-PE
    RpL7A-PF
    RpL7A-PG

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004354.4 Reference assembly

      Range
      6530897..6533348 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001298016.1 → NP_001284945.1  ribosomal protein L7A, isoform F [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001284945.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      A4V411, P46223, Q9W3Z2
      UniProtKB/TrEMBL
      X2JCS6
      Conserved Domains (1) summary
      PTZ00365
      Location:18 → 271
      PTZ00365; 60S ribosomal protein L7Ae-like; Provisional

    2. NM_167073.3 → NP_727094.1  ribosomal protein L7A, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_727094.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      A4V411, P46223, Q9W3Z2
      UniProtKB/TrEMBL
      X2JCS6
      Related
      FBpp0070877
      Conserved Domains (1) summary
      PTZ00365
      Location:18 → 271
      PTZ00365; 60S ribosomal protein L7Ae-like; Provisional

    3. NM_078508.6 → NP_511063.1  ribosomal protein L7A, isoform D [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_511063.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      A4V411, P46223, Q9W3Z2
      UniProtKB/TrEMBL
      X2JCS6
      Related
      FBpp0070878
      Conserved Domains (1) summary
      PTZ00365
      Location:18 → 271
      PTZ00365; 60S ribosomal protein L7Ae-like; Provisional

    4. NM_001298015.1 → NP_001284944.1  ribosomal protein L7A, isoform E [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001284944.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      A4V411, P46223, Q9W3Z2
      UniProtKB/TrEMBL
      X2JCS6
      Conserved Domains (1) summary
      PTZ00365
      Location:18 → 271
      PTZ00365; 60S ribosomal protein L7Ae-like; Provisional

    5. NM_167075.2 → NP_727096.1  ribosomal protein L7A, isoform G [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_727096.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      A4V411, P46223, Q9W3Z2
      UniProtKB/TrEMBL
      X2JCS6
      Related
      FBpp0311460
      Conserved Domains (1) summary
      PTZ00365
      Location:18 → 271
      PTZ00365; 60S ribosomal protein L7Ae-like; Provisional
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P46223.2 P46223
    X2JCS6 X2JCS6

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