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    CG30414 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 37705, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG30414provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0050414
    Locus tag
    Dmel_CG30414
    See related
    AllianceGenome:FB:FBgn0050414
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG3487; Dmel\CG30414; FBgn0050414; SP62
    Summary
    Predicted to enable serine-type endopeptidase activity. Predicted to be involved in proteolysis. Predicted to be active in extracellular space. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG30414 in Genome Data Viewer
    Location:
    59D9-59D9; 2-102 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (23384200..23385468, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (19271723..19272991, complement)

    Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene yellow-d2 Neighboring gene long non-coding RNA:CR44784 Neighboring gene eukaryotic translation initiation factor 2B subunit delta Neighboring gene reduction of Rh1 Neighboring gene Myotubularin related protein 6 Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Competition within Introns: Splicing Wins over Polyadenylation via a General Mechanism. Tikhonov M, et al. Acta Naturae, 2013 Oct. PMID 24455183, Free PMC Article
    2. Genome-wide gene expression in response to parasitoid attack in Drosophila. Wertheim B, et al. Genome Biol, 2005. PMID 16277749, Free PMC Article
    3. Evolution of a cellular immune response in Drosophila: a phenotypic and genomic comparative analysis. Salazar-Jaramillo L, et al. Genome Biol Evol, 2014 Feb. PMID 24443439, Free PMC Article
    4. Inter- and intra-species variation in genome-wide gene expression of Drosophila in response to parasitoid wasp attack. Salazar-Jaramillo L, et al. BMC Genomics, 2017 Apr 27. PMID 28449654, Free PMC Article
    5. A genomic switch at the transition from cell proliferation to terminal differentiation in the Drosophila eye. Jasper H, et al. Dev Cell, 2002 Oct. PMID 12408803

    See all (28) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables serine-type endopeptidase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables serine-type endopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables serine-type endopeptidase activity ISM
    Inferred from Sequence Model
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in proteolysis IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in proteolysis IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in proteolysis ISM
    Inferred from Sequence Model
    more info
    		 PubMed 
    Component Evidence Code Pubs
    is_active_in extracellular space IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG30414-PB
    CG30414-PC
    NP_001163264.1
    NP_611789.2

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.4 Reference assembly

      Range
      23384200..23385468 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001169793.2 → NP_001163264.1  uncharacterized protein Dmel_CG30414, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001163264.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      C5WLM7, Q9W1Q9
      Conserved Domains (2) summary
      smart00020
      Location:41 → 290
      Tryp_SPc; Trypsin-like serine protease
      cd00190
      Location:41 → 290
      Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...

    2. NM_137945.3 → NP_611789.2  uncharacterized protein Dmel_CG30414, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_611789.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      C5WLM7, Q9W1Q9
      Conserved Domains (2) summary
      smart00020
      Location:41 → 290
      Tryp_SPc; Trypsin-like serine protease
      cd00190
      Location:41 → 290
      Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    C5WLM7 C5WLM7

    Gene LinkOut

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