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    CG13806 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 38292, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG13806provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0035325
    Locus tag
    Dmel_CG13806
    See related
    AllianceGenome:FB:FBgn0035325
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG13806
    Summary
    Predicted to enable chitin binding activity. Predicted to be located in extracellular region. Is expressed in embryonic Malpighian tubule; embryonic proventriculus; and embryonic proventriculus inner layer. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG13806 in Genome Data Viewer
    Location:
    62D4-62D4; 3-2 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (2266394..2267640)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (2266394..2267640)

    Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene Elongator complex protein 5 Neighboring gene peptide O-xylosyltransferase Neighboring gene uncharacterized protein Neighboring gene ecdysoneless Neighboring gene antisense RNA:CR45829 Neighboring gene obstructor-I Neighboring gene uncharacterized protein Neighboring gene yellow-g

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. An embryonic system to assess direct and indirect Wnt transcriptional targets. Suresh J, et al. Sci Rep, 2017 Sep 11. PMID 28894169, Free PMC Article
    2. Cell-autonomous roles of the ecdysoneless gene in Drosophila development and oogenesis. Gaziova I, et al. Development, 2004 Jun. PMID 15128659
    3. Intellectual disability-associated dBRWD3 regulates gene expression through inhibition of HIRA/YEM-mediated chromatin deposition of histone H3.3. Chen WY, et al. EMBO Rep, 2015 Apr. PMID 25666827, Free PMC Article
    4. Activating transcription factor 3 regulates immune and metabolic homeostasis. Rynes J, et al. Mol Cell Biol, 2012 Oct. PMID 22851689, Free PMC Article
    5. A Drosophila protein-interaction map centered on cell-cycle regulators. Stanyon CA, et al. Genome Biol, 2004. PMID 15575970, Free PMC Article

    See all (27) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables chitin binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG13806-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.4 Reference assembly

      Range
      2266394..2267640
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_139451.2 → NP_647708.1  uncharacterized protein Dmel_CG13806 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_647708.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8SXL5, Q9W031
      Related
      FBpp0072758
      Conserved Domains (2) summary
      smart00494
      Location:247 → 293
      ChtBD2; Chitin-binding domain type 2
      pfam01607
      Location:105 → 158
      CBM_14; Chitin binding Peritrophin-A domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8SXL5 Q8SXL5

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