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    CG9330 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 40131, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG9330provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0036888
    Locus tag
    Dmel_CG9330
    See related
    AllianceGenome:FB:FBgn0036888
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    DmCG9330; Dmel\CG9330
    Summary
    Predicted to enable ATP binding activity. Is expressed in several structures, including adult head; anterior endoderm; embryonic/larval midgut primordium; larval muscle cell; and mesoderm. Orthologous to human ABCF3 (ATP binding cassette subfamily F member 3). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG9330 in Genome Data Viewer
    Location:
    76B8-76B8; 3-45 cM
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (19586253..19589111)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (19579353..19582211)

    Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene Shaker cognate l Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene absent, small, or homeotic discs 1 Neighboring gene TBP-associated factor 6

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. RNase L-activating 2'-5' oligoadenylates bind ABCF1, ABCF3 and Decr-1. Govande AA, et al. J Gen Virol, 2023 Sep. PMID 37676257
    2. Growth and cell survival are unevenly impaired in pixie mutant wing discs. Coelho CM, et al. Development, 2005 Dec. PMID 16291791
    3. Systematic identification of functional orthologs based on protein network comparison. Bandyopadhyay S, et al. Genome Res, 2006 Mar. PMID 16510899, Free PMC Article
    4. ATP-Binding Cassette (ABC) Transporter Genes Involved in Pyrethroid Resistance in the Malaria Vector Anopheles sinensis: Genome-Wide Identification, Characteristics, Phylogenetics, and Expression Profile. He Q, et al. Int J Mol Sci, 2019 Mar 20. PMID 30897799, Free PMC Article
    5. The ABC gene family in arthropods: comparative genomics and role in insecticide transport and resistance. Dermauw W, et al. Insect Biochem Mol Biol, 2014 Feb. PMID 24291285

    See all (35) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables ATP binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG9330-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.4 Reference assembly

      Range
      19586253..19589111
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_140872.3 → NP_649129.1  uncharacterized protein Dmel_CG9330 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_649129.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8SWU2, Q9VW13
      Related
      FBpp0074708
      Conserved Domains (3) summary
      cd03221
      Location:491 → 685
      ABCF_EF-3; ATP-binding cassette domain of elongation factor 3, subfamily F
      PLN03073
      Location:1 → 698
      PLN03073; ABC transporter F family; Provisional
      pfam12848
      Location:395 → 480
      ABC_tran_Xtn; ABC transporter
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8SWU2 Q8SWU2
    Q9VW13 Q9VW13

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