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    nerfin-2 nervous fingers 2 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 41235, updated on 9-Dec-2024

    Summary

    Official Symbol
    nerfin-2provided by FlyBase
    Official Full Name
    nervous fingers 2provided by FlyBase
    Primary source
    FLYBASE:FBgn0041105
    Locus tag
    Dmel_CG12809
    See related
    AllianceGenome:FB:FBgn0041105
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG12809; Dmel\CG12809; Nerfin
    Summary
    Predicted to enable DNA-binding transcription repressor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in negative regulation of transcription by RNA polymerase II; neuron differentiation; and regulation of cell cycle process. Predicted to be part of transcription repressor complex. Predicted to be active in nucleus. Is expressed in central brain primordium and embryonic brain. Orthologous to human INSM1 (INSM transcriptional repressor 1) and INSM2 (INSM transcriptional repressor 2). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See nerfin-2 in Genome Data Viewer
    Location:
    85F9-85F9; 3-49 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (10071117..10073761)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (5896839..5899483)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene Alkaline phosphatase 13 Neighboring gene long non-coding RNA:CR45054

    Genomic regions, transcripts, and products

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables DNA-binding transcription repressor activity, RNA polymerase II-specific IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Process Evidence Code Pubs
    involved_in negative regulation of transcription by RNA polymerase II IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in neuron differentiation IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in regulation of cell cycle process IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of transcription repressor complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    nervous fingers 2
    Names
    CG12809-PA
    CG12809-PB
    nerfin-2-PA
    nerfin-2-PB
    nervous fingers

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      10071117..10073761
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_079576.3NP_524300.1  nervous fingers 2, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_524300.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VH29
      Related
      FBpp0081655
      Conserved Domains (2) summary
      sd00017
      Location:458481
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:544566
      zf-C2H2; Zinc finger, C2H2 type
    2. NM_001275517.1NP_001262446.1  nervous fingers 2, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001262446.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0B4KH20
      Conserved Domains (2) summary
      sd00017
      Location:458481
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:544566
      zf-C2H2; Zinc finger, C2H2 type