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    gammaSnap2 gamma Soluble NSF attachment protein 2 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 41239, updated on 9-Dec-2024

    Summary

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    Official Symbol
    gammaSnap2provided by FlyBase
    Official Full Name
    gamma Soluble NSF attachment protein 2provided by FlyBase
    Primary source
    FLYBASE:FBgn0266721
    Locus tag
    Dmel_CG6208
    See related
    AllianceGenome:FB:FBgn0266721
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG6208; Dmel\CG6208; gammaSNAP; gammaSnap-2; SNAP-31
    Summary
    Predicted to enable soluble NSF attachment protein activity and syntaxin binding activity. Predicted to be involved in intracellular protein transport. Predicted to be part of SNARE complex. Is expressed in adult head. Orthologous to human NAPG (NSF attachment protein gamma). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See gammaSnap2 in Genome Data Viewer
    Location:
    85F13-85F13; 3-49 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (10120399..10121400, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (5946121..5947122, complement)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene Fragile X messenger ribonucleoprotein 1 Neighboring gene Carbonic anhydrase 7 Neighboring gene ATP synthase, epsilon subunit-like Neighboring gene antisense RNA:CR46038 Neighboring gene knickkopf

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Mechanisms of neurotransmitter release. Littleton JT, et al. Int Rev Neurobiol, 1999. PMID 10218158
    2. Burst of young retrogenes and independent retrogene formation in mammals. Pan D, et al. PLoS One, 2009. PMID 19325906, Free PMC Article
    3. Age-dependent chromosomal distribution of male-biased genes in Drosophila. Zhang YE, et al. Genome Res, 2010 Nov. PMID 20798392, Free PMC Article
    4. RNA interference analysis of Legionella in Drosophila cells: exploitation of early secretory apparatus dynamics. Dorer MS, et al. PLoS Pathog, 2006 Apr. PMID 16652170, Free PMC Article
    5. A cautionary note for retrocopy identification: DNA-based duplication of intron-containing genes significantly contributes to the origination of single exon genes. Zhang YE, et al. Bioinformatics, 2011 Jul 1. PMID 21551137, Free PMC Article

    See all (29) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables soluble NSF attachment protein activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables soluble NSF attachment protein activity NAS
    Non-traceable Author Statement
    more info
    		 PubMed 
    enables syntaxin binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in intracellular protein transport IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in intracellular protein transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in neurotransmitter secretion NAS
    Non-traceable Author Statement
    more info
    		 PubMed 
    involved_in synaptic vesicle priming NAS
    Non-traceable Author Statement
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of SNARE complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in cytoplasm NAS
    Non-traceable Author Statement
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    gamma soluble NSF attachment protein 2
    Names
    CG6208-PA
    gammaSnap-2
    gammaSnap2-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      10120399..10121400 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_141723.2 → NP_649980.1  gamma soluble NSF attachment protein 2 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_649980.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      C3KGI9, Q9VH25
      Related
      FBpp0081673
      Conserved Domains (2) summary
      cd15832
      Location:29 → 61
      SNAP; TPR repeat [structural motif]
      cl24038
      Location:29 → 239
      SNAP; Soluble N-ethylmaleimide-sensitive factor (NSF) Attachment Protein family
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VH25 Q9VH25

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