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    Uhg1 U snoRNA host gene 1 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 3772106, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Uhg1provided by FlyBase
    Official Full Name
    U snoRNA host gene 1provided by FlyBase
    Primary source
    FLYBASE:FBgn0045800
    Locus tag
    Dmel_CR32886
    See related
    AllianceGenome:FB:FBgn0045800
    Gene type
    ncRNA
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    BEST:GM03135; CG14486; CR32886; Dmel\CR32886; Dros-UHG1; dUhg1; dUHG1; FBgn0040741
    Summary
    Is expressed in adult brain cell body rind. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See Uhg1 in Genome Data Viewer
    Location:
    54D6-54E1; 2-83 cM
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (17699097..17703344)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (13586602..13590849)

    Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene Hermansky-Pudlak Syndrome 4 Neighboring gene ncRNA Neighboring gene swi2 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene antisense RNA:CR45146 Neighboring gene ncRNA Neighboring gene rdgBbeta Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene Dachs ligand with SH3s Neighboring gene Sorting nexin 16

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A Likelihood Approach for Uncovering Selective Sweep Signatures from Haplotype Data. Harris AM, et al. Mol Biol Evol, 2020 Oct 1. PMID 32392293, Free PMC Article
    2. Deep sequencing the circadian and diurnal transcriptome of Drosophila brain. Hughes ME, et al. Genome Res, 2012 Jul. PMID 22472103, Free PMC Article
    3. snoRNAs are a novel class of biologically relevant Myc targets. Herter EK, et al. BMC Biol, 2015 Apr 16. PMID 25888729, Free PMC Article
    4. Non-coding snoRNA host genes in Drosophila: expression strategies for modification guide snoRNAs. Tycowski KT, et al. Eur J Cell Biol, 2001 Feb. PMID 11302516
    5. A computational search for box C/D snoRNA genes in the Drosophila melanogaster genome. Accardo MC, et al. Bioinformatics, 2004 Dec 12. PMID 15247100

    See all (15) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    • Uhg1-RA; Dmel\Uhg1-RA; CR32886-RA; Dmel\CR32886-RA
    • Uhg1-RB; Dmel\Uhg1-RB; CR32886-RB; Dmel\CR32886-RB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.4 Reference assembly

      Range
      17699097..17703344
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. NR_001754.2 RNA Sequence

      Status: REVIEWED

    2. NR_073887.1 RNA Sequence

      Status: REVIEWED

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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