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    CG15439 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 33651, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG15439provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0031606
    Locus tag
    Dmel_CG15439
    See related
    AllianceGenome:FB:FBgn0031606
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG15439
    Summary
    Predicted to be involved in regulation of transcription by RNA polymerase II. Is expressed in organism. Orthologous to human PHF14 (PHD finger protein 14). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG15439 in Genome Data Viewer
    Location:
    24F3-24F3; 2-12 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (4449295..4453038, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (4449295..4453038, complement)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene modifier of rpr and grim, ubiquitously expressed Neighboring gene Elongator complex protein 3 Neighboring gene Major Facilitator Superfamily Transporter 18 Neighboring gene tRNA Selenocysteine associated protein Neighboring gene NADH dehydrogenase (ubiquinone) B8 subunit Neighboring gene GS1-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The PHD finger, a nuclear protein-interaction domain. Bienz M. Trends Biochem Sci, 2006 Jan. PMID 16297627
    2. A screen for E3 ubiquitination ligases that genetically interact with the adaptor protein Cindr during Drosophila eye patterning. Ketosugbo KF, et al. PLoS One, 2017. PMID 29117266, Free PMC Article
    3. Genome-wide analysis of Notch signalling in Drosophila by transgenic RNAi. Mummery-Widmer JL, et al. Nature, 2009 Apr 23. PMID 19363474, Free PMC Article
    4. Regulation of Drosophila mesoderm migration by phosphoinositides and the PH domain of the Rho GTP exchange factor Pebble. Murray MJ, et al. Dev Biol, 2012 Dec 1. PMID 23000359
    5. Next-generation large-scale binary protein interaction network for Drosophila melanogaster. Tang HW, et al. Nat Commun, 2023 Apr 15. PMID 37061542, Free PMC Article

    See all (26) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG15439-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      4449295..4453038 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_134992.3 → NP_608836.1  uncharacterized protein Dmel_CG15439 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_608836.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VQZ8
      Related
      FBpp0077145
      Conserved Domains (4) summary
      cd15561
      Location:120 → 175
      PHD1_PHF14; PHD finger 1 found in PHD finger protein 14 (PHF14) and similar proteins
      cd15562
      Location:586 → 635
      PHD2_PHF14; PHD finger 2 found in PHD finger protein 14 (PHF14) and similar proteins
      cd15563
      Location:949 → 997
      PHD3_PHF14; PHD finger 3 found in PHD finger protein 14 (PHF14) and similar proteins
      cd15674
      Location:184 → 297
      ePHD_PHF14; Extended PHD finger found in PHD finger protein 14 (PHF14) and similar proteins
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8T096 Q8T096
    Q9VQZ8 Q9VQZ8

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