U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    dob doppelganger von brummer [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 32436, updated on 9-Dec-2024

    Summary

    Official Symbol
    dobprovided by FlyBase
    Official Full Name
    doppelganger von brummerprovided by FlyBase
    Primary source
    FLYBASE:FBgn0030607
    Locus tag
    Dmel_CG5560
    See related
    AllianceGenome:FB:FBgn0030607
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG5560; Dmel\CG5560; Dob
    Summary
    Predicted to enable triacylglycerol lipase activity. Predicted to be involved in lipid homeostasis and triglyceride catabolic process. Predicted to be active in cytoplasm; lipid droplet; and membrane. Is expressed in organism. Human ortholog(s) of this gene implicated in autosomal recessive congenital ichthyosis 10; coronary artery disease; liver disease (multiple); and type 2 diabetes mellitus. Orthologous to several human genes including PNPLA2 (patatin like phospholipase domain containing 2); PNPLA3 (patatin like phospholipase domain containing 3); and PNPLA5 (patatin like phospholipase domain containing 5). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See dob in Genome Data Viewer
    Location:
    13A8-13A8; 1-49 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (15067007..15069091)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (14961040..14963124)

    Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene highwire Neighboring gene uncharacterized protein Neighboring gene NADH dehydrogenase (ubiquinone) B18 subunit Neighboring gene opossum Neighboring gene long non-coding RNA:CR44662 Neighboring gene Lipid storage droplet-2 Neighboring gene long non-coding RNA:CR44661

    Genomic regions, transcripts, and products

    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables hydrolase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables triacylglycerol lipase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables triacylglycerol lipase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in lipid catabolic process IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in lipid homeostasis IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in triglyceride catabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in triglyceride catabolic process ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    is_active_in lipid droplet IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    is_active_in membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    doppelganger von brummer
    Names
    CG5560-PA
    dob-PA
    NP_572995.1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004354.4 Reference assembly

      Range
      15067007..15069091
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_132767.3NP_572995.1  doppelganger von brummer [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_572995.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VXY8
      Related
      FBpp0073778
      Conserved Domains (2) summary
      cd07218
      Location:7253
      Pat_iPLA2; Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2
      cl04813
      Location:270375
      EIN3; Ethylene insensitive 3