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    NimC3 Nimrod C3 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 48772, updated on 9-Dec-2024

    Summary

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    Official Symbol
    NimC3provided by FlyBase
    Official Full Name
    Nimrod C3provided by FlyBase
    Primary source
    FLYBASE:FBgn0001967
    Locus tag
    Dmel_CG16880
    See related
    AllianceGenome:FB:FBgn0001967
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    BG:DS05899.2; br30; CG16880; Dmel\CG16880; I(2)34Fa; l(2)34Fa; l(2)br30; l(2)k00811; l34Fa; nimC3
    Summary
    Predicted to be involved in phagocytosis. Predicted to be located in membrane. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See NimC3 in Genome Data Viewer
    Location:
    34F1-34F1; 2-50 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (14019357..14020208, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (14019357..14020208, complement)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene transfer RNA:Glutamine-CTG 4-1 Neighboring gene bubblegum Neighboring gene antisense RNA:CR44849 Neighboring gene long non-coding RNA:CR45352 Neighboring gene long non-coding RNA:CR31840

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Analysis of ENU-induced mutations at the Adh locus in Drosophila melanogaster. Fossett NG, et al. Mutat Res, 1990 Jul. PMID 2114535
    2. Evolution of genes and repeats in the Nimrod superfamily. Somogyi K, et al. Mol Biol Evol, 2008 Nov. PMID 18703524
    3. Nimrod, a putative phagocytosis receptor with EGF repeats in Drosophila plasmatocytes. Kurucz E, et al. Curr Biol, 2007 Apr 3. PMID 17363253
    4. A selective screen to recover chromosomal deletions and duplications in Drosophila melanogaster. Gubb D, et al. Genetics, 1988 Jun. PMID 3135239, Free PMC Article
    5. A conserved gene cluster as a putative functional unit in insect innate immunity. Somogyi K, et al. FEBS Lett, 2010 Nov 5. PMID 20951134

    See all (46) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in immune response IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in phagocytosis IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in phagocytosis ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane ISM
    Inferred from Sequence Model
    more info
    		  
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    nimrod C3
    Names
    CG16880-PB
    NimC3-PB
    lethal (2) 34Fa

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      14019357..14020208 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_080189.5 → NP_524928.2  nimrod C3 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_524928.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9N6X5, Q9VJU2
      Conserved Domains (1) summary
      pfam09402
      Location:85 → 212
      MSC; Man1-Src1p-C-terminal domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VJU2 Q9VJU2

    Gene LinkOut

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