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    CG5828 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 33742, updated on 9-Dec-2024

    Summary

    Official Symbol
    CG5828provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0031682
    Locus tag
    Dmel_CG5828
    See related
    AllianceGenome:FB:FBgn0031682
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG5828
    Summary
    Predicted to enable pantothenate kinase activity. Predicted to be involved in coenzyme A biosynthetic process. Predicted to be located in cytoplasm. Predicted to be active in cytosol and nucleus. Is expressed in several structures, including embryonic/larval crystal cell; embryonic/larval midgut; posterior endoderm; somatic precursor cell; and yolk nucleus. Human ortholog(s) of this gene implicated in cataract. Orthologous to human PANK4 (pantothenate kinase 4 (inactive)). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    NEW
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    Genomic context

    See CG5828 in Genome Data Viewer
    Location:
    25C6-25C6; 2-15 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (5093976..5095910)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (5093976..5095910)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene antisense RNA:CR45305 Neighboring gene Ribosomal protein L37A Neighboring gene Polypeptide N-Acetylgalactosaminyltransferase 5 Neighboring gene uncharacterized protein Neighboring gene NADH dehydrogenase (ubiquinone) 13 kDa A subunit Neighboring gene Muscle-specific protein 300 kDa Neighboring gene small non-coding RNA 765

    Genomic regions, transcripts, and products

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables pantothenate kinase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables pantothenate kinase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables pantothenate kinase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Process Evidence Code Pubs
    involved_in coenzyme A biosynthetic process IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in coenzyme A biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in coenzyme A biosynthetic process ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Component Evidence Code Pubs
    located_in cytoplasm ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    is_active_in cytosol IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in nucleus ISS
    Inferred from Sequence or Structural Similarity
    more info
     

    General protein information

    Preferred Names
    uncharacterized protein
    Names
    CG5828-PA
    CG5828-PB
    NP_001260085.1
    NP_608907.1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      5093976..5095910
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001273156.2NP_001260085.1  uncharacterized protein Dmel_CG5828, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001260085.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8MRA2, Q9VMU2
      Conserved Domains (1) summary
      pfam01937
      Location:54347
      DUF89; Protein of unknown function DUF89
    2. NM_135063.2NP_608907.1  uncharacterized protein Dmel_CG5828, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_608907.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8MRA2, Q9VMU2
      Related
      FBpp0078657
      Conserved Domains (1) summary
      pfam01937
      Location:54347
      DUF89; Protein of unknown function DUF89