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    CG5892 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 42522, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG5892provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0038873
    Locus tag
    Dmel_CG5892
    See related
    AllianceGenome:FB:FBgn0038873
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG5892
    Summary
    Predicted to enable acyltransferase activity, transferring groups other than amino-acyl groups. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG5892 in Genome Data Viewer
    Location:
    93D1-93D1; 3-71 cM
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (21242618..21245418)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (17068340..17071140)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR44265 Neighboring gene Negative elongation factor A Neighboring gene ebony Neighboring gene ETHR Neighboring gene antisense RNA:CR45798 Neighboring gene Rab1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Natural variation of ebony gene controlling thoracic pigmentation in Drosophila melanogaster. Takahashi A, et al. Genetics, 2007 Oct. PMID 17660557, Free PMC Article
    2. Cloning of the neurodegeneration gene drop-dead and characterization of additional phenotypes of its mutation. Blumenthal EM. Fly (Austin), 2008 Jul-Aug. PMID 18719404, Free PMC Article
    3. A novel mode of induction of the humoral innate immune response in Drosophila larvae. Kenmoku H, et al. Dis Model Mech, 2017 Mar 1. PMID 28250052, Free PMC Article
    4. Drosophila p53 directs nonapoptotic programs in postmitotic tissue. Kurtz P, et al. Mol Biol Cell, 2019 May 15. PMID 30892991, Free PMC Article
    5. Nutrient control of gene expression in Drosophila: microarray analysis of starvation and sugar-dependent response. Zinke I, et al. EMBO J, 2002 Nov 15. PMID 12426388, Free PMC Article

    See all (25) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables acyltransferase activity, transferring groups other than amino-acyl groups IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG5892-PB
    NP_650959.2

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      21242618..21245418
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_142702.2 → NP_650959.2  uncharacterized protein Dmel_CG5892 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_650959.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VDC5
      Conserved Domains (3) summary
      smart00703
      Location:90 → 203
      NRF; N-terminal domain in C. elegans NRF-6 (Nose Resistant to Fluoxetine-4) and NDG-4 (resistant to nordihydroguaiaretic acid-4)
      COG1835
      Location:277 → 685
      OafA; Peptidoglycan/LPS O-acetylase OafA/YrhL, contains acyltransferase and SGNH-hydrolase domains [Cell wall/membrane/envelope biogenesis]
      pfam01757
      Location:272 → 656
      Acyl_transf_3; Acyltransferase family
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8MS58 Q8MS58
    Q9VDC5 Q9VDC5

    Gene LinkOut

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