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    lncRNA:CR32658 long non-coding RNA:CR32658 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 3772624, updated on 11-Sep-2024

    Summary

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    Official Symbol
    lncRNA:CR32658provided by FlyBase
    Official Full Name
    long non-coding RNA:CR32658provided by FlyBase
    Primary source
    FLYBASE:FBgn0040859
    Locus tag
    Dmel_CR32658
    See related
    AllianceGenome:FB:FBgn0040859
    Gene type
    ncRNA
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG11358; CR32658; Dmel\CR32658
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    Genomic context

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    See lncRNA:CR32658 in Genome Data Viewer
    Location:
    11A3-11A3; 1-38 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (12091264..12092272)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (11985297..11986305)

    Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR43960 Neighboring gene Tenascin accessory Neighboring gene long non-coding RNA:CR32657 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. RNAseq Analysis of the Drosophila Response to the Entomopathogenic Nematode Steinernema. Yadav S, et al. G3 (Bethesda), 2017 Jun 7. PMID 28450373, Free PMC Article
    2. High-fidelity promoter profiling reveals widespread alternative promoter usage and transposon-driven developmental gene expression. Batut P, et al. Genome Res, 2013 Jan. PMID 22936248, Free PMC Article
    3. Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species. Sanfilippo P, et al. Genome Biol, 2017 Nov 30. PMID 29191225, Free PMC Article
    4. Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster. Liu X, et al. RNA, 2017 Dec. PMID 28851752, Free PMC Article
    5. The many landscapes of recombination in Drosophila melanogaster. Comeron JM, et al. PLoS Genet, 2012. PMID 23071443, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    • lncRNA:CR32658-RA; Dmel\lncRNA:CR32658-RA; CR32658-RA; Dmel\CR32658-RA
    • lncRNA:CR32658-RB; Dmel\lncRNA:CR32658-RB; CR32658-RB; Dmel\CR32658-RB
    • lncRNA:CR32658-RC; Dmel\lncRNA:CR32658-RC; CR32658-RC; Dmel\CR32658-RC

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004354.4 Reference assembly

      Range
      12091264..12092272
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. NR_002111.2 RNA Sequence

      Status: REVIEWED

    2. NR_002110.3 RNA Sequence

      Status: REVIEWED

    3. NR_002109.2 RNA Sequence

      Status: REVIEWED

    Nucleotide Protein
    Heading Accession and Version

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