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    CG32564 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 326222, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG32564provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0052564
    Locus tag
    Dmel_CG32564
    See related
    AllianceGenome:FB:FBgn0052564
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG5095; Dmel\CG32564
    Summary
    Predicted to enable transcription coactivator activity. Predicted to be a structural constituent of chitin-based cuticle. Predicted to be involved in positive regulation of transcription by RNA polymerase II. Predicted to be located in chitin-based extracellular matrix. Predicted to be part of RNA polymerase II transcription regulator complex. Is expressed in adult head; embryonic anal pad; embryonic large intestine; hindgut proper primordium; and large intestine primordium. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG32564 in Genome Data Viewer
    Location:
    15F3-15F3; 1-57 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (17206407..17207854)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (17100440..17101887)

    Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene bazooka Neighboring gene Tubulin tyrosine ligase-like 1A Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Structural cuticular proteins from arthropods: annotation, nomenclature, and sequence characteristics in the genomics era. Willis JH. Insect Biochem Mol Biol, 2010 Mar. PMID 20171281, Free PMC Article
    2. Genome-Wide Expression Analysis of Long Noncoding RNAs and Their Target Genes in Metafemale Drosophila. Liu X, et al. Int J Mol Sci, 2023 May 6. PMID 37176087, Free PMC Article
    3. Annotation and analysis of low-complexity protein families of Anopheles gambiae that are associated with cuticle. Cornman RS, et al. Insect Mol Biol, 2009 Oct. PMID 19754739, Free PMC Article
    4. Conserved chromosomal clustering of genes governed by chromatin regulators in Drosophila. Blanco E, et al. Genome Biol, 2008. PMID 18783608, Free PMC Article
    5. Flying toward a plastic-free world: Can Drosophila serve as a model organism to develop new strategies of plastic waste management? Pignataro E, et al. Sci Total Environ, 2024 Mar 1. PMID 38199375

    See all (22) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables structural constituent of chitin-based cuticle ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    enables transcription coactivator activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in positive regulation of transcription by RNA polymerase II IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    part_of RNA polymerase II transcription regulator complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in chitin-based extracellular matrix ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG32564-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004354.4 Reference assembly

      Range
      17206407..17207854
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_167559.3 → NP_728056.1  uncharacterized protein Dmel_CG32564 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_728056.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8IR01
      Related
      FBpp0074164
      Conserved Domains (1) summary
      PRK12323
      Location:165 → 319
      PRK12323; DNA polymerase III subunits gamma and tau; Provisional
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8IR01 Q8IR01

    Gene LinkOut

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