U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Spg7 Paraplegin [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 31253, updated on 9-Dec-2024

    Summary

    Official Symbol
    Spg7provided by FlyBase
    Official Full Name
    Parapleginprovided by FlyBase
    Primary source
    FLYBASE:FBgn0024992
    Locus tag
    Dmel_CG2658
    See related
    AllianceGenome:FB:FBgn0024992
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    anon-3Ba; CG2658; Dm100G10.aj; Dmel\CG2658; EG:100G10.7; SPG7
    Summary
    Predicted to enable metalloendopeptidase activity. Predicted to be involved in mitochondrial protein processing and regulation of mitochondrial membrane permeability. Located in mitochondrion. Part of m-AAA complex. Is expressed in adult head and spermatozoon. Used to study hereditary spastic paraplegia 7. Human ortholog(s) of this gene implicated in hereditary spastic paraplegia 7. Orthologous to human SPG7 (SPG7 matrix AAA peptidase subunit, paraplegin). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Spg7 in Genome Data Viewer
    Location:
    3B2-3B2; 1-1.5 cM
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (2694392..2698211, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (2588425..2592244, complement)

    Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR44470 Neighboring gene uncharacterized protein Neighboring gene period Neighboring gene daywake Neighboring gene L(3)mbt interactor in ovarian somatic cells Neighboring gene UDP-galactose transporter

    Genomic regions, transcripts, and products

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables ATP-dependent peptidase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables metalloendopeptidase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables metalloendopeptidase activity IC
    Inferred by Curator
    more info
    PubMed 
    enables metalloendopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables metalloendopeptidase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in mitochondrial protein processing IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in proteolysis IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in regulation of mitochondrial membrane permeability ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Component Evidence Code Pubs
    part_of m-AAA complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of m-AAA complex IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in mitochondrion IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in mitochondrion ISS
    Inferred from Sequence or Structural Similarity
    more info
     

    General protein information

    Preferred Names
    paraplegin
    Names
    CG2658-PA
    CG2658-PC
    Spg7-PA
    Spg7-PC
    paraplegin_DROME
    NP_570017.1
    NP_996339.2

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004354.4 Reference assembly

      Range
      2694392..2698211 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_206616.2NP_996339.2  paraplegin, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_996339.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      O76867, Q9W4W8
      Conserved Domains (4) summary
      TIGR01241
      Location:333787
      FtsH_fam; ATP-dependent metalloprotease FtsH
      pfam00004
      Location:378513
      AAA; ATPase family associated with various cellular activities (AAA)
      pfam01434
      Location:595785
      Peptidase_M41; Peptidase family M41
      pfam06480
      Location:171276
      FtsH_ext; FtsH Extracellular
    2. NM_130661.2NP_570017.1  paraplegin, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_570017.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      O76867, Q9W4W8
      Related
      FBpp0070479
      Conserved Domains (4) summary
      TIGR01241
      Location:333787
      FtsH_fam; ATP-dependent metalloprotease FtsH
      pfam00004
      Location:378513
      AAA; ATPase family associated with various cellular activities (AAA)
      pfam01434
      Location:595785
      Peptidase_M41; Peptidase family M41
      pfam06480
      Location:171276
      FtsH_ext; FtsH Extracellular