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    CG42541 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 31344, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG42541provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0260658
    Locus tag
    Dmel_CG42541
    See related
    AllianceGenome:FB:FBgn0260658
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    BcDNA:RH43809; CG15240; CG16828; CG16829; CG32776; Dmel\CG42541
    Old locus tag
    Dmel_CG15240; Dmel_CG32776
    Summary
    Predicted to enable GTP binding activity and calcium channel regulator activity. Predicted to be active in plasma membrane. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG42541 in Genome Data Viewer
    Location:
    3F4-3F7; 1-5 cM
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (3891497..3930578, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (3785530..3824611, complement)

    Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene Vacuolar H[+] ATPase AC39 subunit 1 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene Gaulos

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome ARTIST_v2-An Autonomous Bioinformatics Tool for Annotation of Natural Transposons in Sequenced Genomes. Ecovoiu AA, et al. Int J Mol Sci, 2022 Oct 21. PMID 36293549, Free PMC Article
    2. Akt1 and dCIZ1 promote cell survival from apoptotic caspase activation during regeneration and oncogenic overgrowth. Sun G, et al. Nat Commun, 2020 Nov 12. PMID 33184261, Free PMC Article
    3. Evolutionary expansion of the Ras switch regulatory module in eukaryotes. Díez D, et al. Nucleic Acids Res, 2011 Jul. PMID 21447561, Free PMC Article
    4. Chromosome-wide gene-specific targeting of the Drosophila dosage compensation complex. Gilfillan GD, et al. Genes Dev, 2006 Apr 1. PMID 16547172, Free PMC Article
    5. Genome wide identification of fruitless targets suggests a role in upregulating genes important for neural circuit formation. Vernes SC. Sci Rep, 2014 Mar 19. PMID 24642956, Free PMC Article

    See all (29) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables GTP binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables calcium channel regulator activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG42541-PC
    CG42541-PD
    CG42541-PE
    CG42541-PF

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004354.4 Reference assembly

      Range
      3891497..3930578 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001272295.1 → NP_001259224.1  uncharacterized protein Dmel_CG42541, isoform E [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001259224.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      M9PGL8
      Conserved Domains (2) summary
      smart00010
      Location:1007 → 1170
      small_GTPase; Small GTPase of the Ras superfamily; ill-defined subfamily
      cd04148
      Location:1007 → 1174
      RGK; Rem, Rem2, Rad, Gem/Kir (RGK) subfamily of Ras GTPases

    2. NM_001272296.1 → NP_001259225.1  uncharacterized protein Dmel_CG42541, isoform F [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001259225.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      M9PJ04
      Conserved Domains (2) summary
      smart00010
      Location:989 → 1152
      small_GTPase; Small GTPase of the Ras superfamily; ill-defined subfamily
      cd04148
      Location:989 → 1156
      RGK; Rem, Rem2, Rad, Gem/Kir (RGK) subfamily of Ras GTPases

    3. NM_001038740.3 → NP_001033829.2  uncharacterized protein Dmel_CG42541, isoform D [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001033829.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q2PE29
      Conserved Domains (2) summary
      smart00010
      Location:1007 → 1170
      small_GTPase; Small GTPase of the Ras superfamily; ill-defined subfamily
      cd04148
      Location:1007 → 1174
      RGK; Rem, Rem2, Rad, Gem/Kir (RGK) subfamily of Ras GTPases

    4. NM_206622.4 → NP_996345.3  uncharacterized protein Dmel_CG42541, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_996345.3

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q7KVX6
      Conserved Domains (2) summary
      smart00010
      Location:1008 → 1171
      small_GTPase; Small GTPase of the Ras superfamily; ill-defined subfamily
      cd04148
      Location:1008 → 1175
      RGK; Rem, Rem2, Rad, Gem/Kir (RGK) subfamily of Ras GTPases
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    M9PGL8 M9PGL8
    M9PJ04 M9PJ04
    Q2PE29 Q2PE29
    Q7KVX6 Q7KVX6
    Q8MR38 Q8MR38
    Q8MS07 Q8MS07

    Gene LinkOut

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