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    Xrcc2 X-ray repair cross complementing 2 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 32837, updated on 9-Dec-2024

    Summary

    Official Symbol
    Xrcc2provided by FlyBase
    Official Full Name
    X-ray repair cross complementing 2provided by FlyBase
    Primary source
    FLYBASE:FBgn0030931
    Locus tag
    Dmel_CG6318
    See related
    AllianceGenome:FB:FBgn0030931
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG6318; Dm CG6318; Dmel\CG6318; dmRad51D; Rad51D; XRCC2
    Summary
    Predicted to enable DNA strand exchange activity. Predicted to contribute to four-way junction DNA binding activity. Predicted to be involved in DNA strand invasion and double-strand break repair via homologous recombination. Predicted to be part of Rad51B-Rad51C-Rad51D-XRCC2 complex. Predicted to be active in centrosome and replication fork. Human ortholog(s) of this gene implicated in Fanconi anemia complementation group U; pancreatic cancer; primary ovarian insufficiency 17; and spermatogenic failure 50. Orthologous to human XRCC2 (X-ray repair cross complementing 2). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    NEW
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    Genomic context

    See Xrcc2 in Genome Data Viewer
    Location:
    17B6-17B6; 1-60 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (18500127..18501258)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (18394160..18395291)

    Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR45627 Neighboring gene Polypeptide N-Acetylgalactosaminyltransferase 7 Neighboring gene Wnt oncogene analog 5 Neighboring gene gamma-glutamyl transpeptidase

    Genomic regions, transcripts, and products

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables DNA strand exchange activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    contributes_to four-way junction DNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Process Evidence Code Pubs
    involved_in DNA recombination ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    involved_in DNA repair ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    involved_in DNA strand invasion IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in double-strand break repair via homologous recombination IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in double-strand break repair via homologous recombination IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    part_of Rad51B-Rad51C-Rad51D-XRCC2 complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of Rad51B-Rad51C-Rad51D-XRCC2 complex IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in centrosome IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    is_active_in replication fork IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in replication fork IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    X-ray repair cross complementing 2
    Names
    CG6318-PA
    Rad51D
    Xrcc2-PA

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004354.4 Reference assembly

      Range
      18500127..18501258
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_133074.3NP_573302.1  X-ray repair cross complementing 2 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_573302.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q4V3S9, Q9VWT5
      Related
      FBpp0074364
      Conserved Domains (1) summary
      cl21455
      Location:24179
      P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases