CG9394 uncharacterized protein [Drosophila melanogaster (fruit fly)] - Gene

Summary

Official Symbol: CG9394provided by FlyBase
Official Full Name: uncharacterized proteinprovided by FlyBase
Primary source: FLYBASE:FBgn0034588
Locus tag: Dmel_CG9394
See related: AllianceGenome:FB:FBgn0034588
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Drosophila melanogaster
Lineage: Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as: anon-EST:Posey227; Dmel\CG9394
Summary: Predicted to enable glycerophosphocholine phosphodiesterase activity. Predicted to be involved in glycerophospholipid catabolic process. Is expressed in adult head; embryonic midgut chamber; and embryonic/larval midgut. Orthologous to human GPCPD1 (glycerophosphocholine phosphodiesterase 1). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs: all
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Genomic context

Location:: 57C1-57C1; 2-93 cM

Exon count:: 1

Annotation release	Status	Assembly	Chr	Location
Release 6.54	current	Release 6 plus ISO1 MT (GCF_000001215.4)	2R	NT_033778.4 (21118394..21120705)
Release 5.57	previous assembly	Release 5 (GCF_000001215.2)	2R	NT_033778.3 (17005899..17008210)

Chromosome 2R - NT_033778.4 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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Homology

NCBI Orthologs

Orthologs from OrthoDB

Gene Ontology Provided by FlyBase

Function	Evidence Code	Pubs
enables glycerophosphocholine phosphodiesterase activity	IBA Inferred from Biological aspect of Ancestor more info
enables phosphoric diester hydrolase activity	IEA Inferred from Electronic Annotation more info
enables starch binding	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
involved_in glycerophospholipid catabolic process	IBA Inferred from Biological aspect of Ancestor more info
involved_in lipid metabolic process	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: uncharacterized protein

Names: CG9394-PA; CG9394-PB

NP_001286660.1

EC 3.1.4.-

EC 3.1.4.2

NP_611548.1

EC 3.1.4.-

EC 3.1.4.2

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

NT_033778.4 Reference assembly

Range

21118394..21120705

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

NM_137704.3 → NP_611548.1 uncharacterized protein Dmel_CG9394, isoform A [Drosophila melanogaster]

See identical proteins and their annotated locations for NP_611548.1

Status: REVIEWED

UniProtKB/TrEMBL

Q9W2L6

Related

FBpp0071495

Conserved Domains (3) summary

cd08607
Location:345 → 630

GDPD_GDE5; Glycerophosphodiester phosphodiesterase domain of putative mammalian glycerophosphodiester phosphodiesterase GDE5 and similar proteins

pfam03009
Location:349 → 632

GDPD; Glycerophosphoryl diester phosphodiesterase family

cl15347
Location:47 → 169

CBM20; The family 20 carbohydrate-binding module (CBM20), also known as the starch-binding domain, is found in a large number of starch degrading enzymes including alpha-amylase, beta-amylase, glucoamylase, and CGTase (cyclodextrin glucanotransferase). CBM20 is ...
NM_001299731.1 → NP_001286660.1 uncharacterized protein Dmel_CG9394, isoform B [Drosophila melanogaster]

See identical proteins and their annotated locations for NP_001286660.1

Status: REVIEWED

UniProtKB/TrEMBL

Q9W2L6

Conserved Domains (3) summary

cd08607
Location:345 → 630

GDPD_GDE5; Glycerophosphodiester phosphodiesterase domain of putative mammalian glycerophosphodiester phosphodiesterase GDE5 and similar proteins

pfam03009
Location:349 → 632

GDPD; Glycerophosphoryl diester phosphodiesterase family

cl15347
Location:47 → 169

CBM20; The family 20 carbohydrate-binding module (CBM20), also known as the starch-binding domain, is found in a large number of starch degrading enzymes including alpha-amylase, beta-amylase, glucoamylase, and CGTase (cyclodextrin glucanotransferase). CBM20 is ...