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    mRpL21 mitochondrial ribosomal protein L21 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 40091, updated on 9-Dec-2024

    Summary

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    Official Symbol
    mRpL21provided by FlyBase
    Official Full Name
    mitochondrial ribosomal protein L21provided by FlyBase
    Primary source
    FLYBASE:FBgn0036853
    Locus tag
    Dmel_CG9730
    See related
    AllianceGenome:FB:FBgn0036853
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG9730; Dmel\CG9730; MRP-L21
    Summary
    Predicted to be a structural constituent of ribosome. Predicted to be involved in mitochondrial translation. Predicted to be located in ribosome. Predicted to be part of mitochondrial large ribosomal subunit. Orthologous to human MRPL21 (mitochondrial ribosomal protein L21). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See mRpL21 in Genome Data Viewer
    Location:
    76A3-76A3; 3-45 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (19253290..19255061, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (19246390..19248161, complement)

    Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR43892 Neighboring gene long non-coding RNA:CR46216 Neighboring gene reptin Neighboring gene antisense RNA:CR45210 Neighboring gene nessy

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The large subunit of the mammalian mitochondrial ribosome. Analysis of the complement of ribosomal proteins present. Koc EC, et al. J Biol Chem, 2001 Nov 23. PMID 11551941
    2. Identification and Characterization of Breakpoints and Mutations on Drosophila melanogaster Balancer Chromosomes. Miller DE, et al. G3 (Bethesda), 2020 Nov 5. PMID 32972999, Free PMC Article
    3. Toll mediated infection response is altered by gravity and spaceflight in Drosophila. Taylor K, et al. PLoS One, 2014. PMID 24475130, Free PMC Article
    4. The SIN3 deacetylase complex represses genes encoding mitochondrial proteins: implications for the regulation of energy metabolism. Pile LA, et al. J Biol Chem, 2003 Sep 26. PMID 12865422
    5. The genetic makeup of the Drosophila piRNA pathway. Handler D, et al. Mol Cell, 2013 Jun 6. PMID 23665231, Free PMC Article

    See all (30) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables structural constituent of ribosome IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables structural constituent of ribosome ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    enables structural constituent of ribosome TAS
    Traceable Author Statement
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in mitochondrial translation IC
    Inferred by Curator
    more info
    		  
    involved_in mitochondrial translation TAS
    Traceable Author Statement
    more info
    		 PubMed 
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    part_of mitochondrial large ribosomal subunit IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    part_of mitochondrial large ribosomal subunit ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    part_of mitochondrial large ribosomal subunit TAS
    Traceable Author Statement
    more info
    		 PubMed 
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    mitochondrial ribosomal protein L21
    Names
    CG9730-PA
    CG9730-PB
    CG9730-PC
    mRpL21-PA
    mRpL21-PB
    mRpL21-PC

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.4 Reference assembly

      Range
      19253290..19255061 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001300183.1 → NP_001287112.1  mitochondrial ribosomal protein L21, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001287112.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VVX4
      Conserved Domains (1) summary
      pfam00829
      Location:85 → 175
      Ribosomal_L21p; Ribosomal prokaryotic L21 protein

    2. NM_001275110.1 → NP_001262039.1  mitochondrial ribosomal protein L21, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001262039.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VVX4
      Conserved Domains (1) summary
      pfam00829
      Location:85 → 175
      Ribosomal_L21p; Ribosomal prokaryotic L21 protein

    3. NM_140838.3 → NP_649095.2  mitochondrial ribosomal protein L21, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_649095.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VVX4
      Related
      FBpp0074789
      Conserved Domains (1) summary
      pfam00829
      Location:85 → 175
      Ribosomal_L21p; Ribosomal prokaryotic L21 protein
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8SYD8 Q8SYD8
    Q9VVX4 Q9VVX4

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