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    CG1161 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 40638, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG1161provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0037313
    Locus tag
    Dmel_CG1161
    See related
    AllianceGenome:FB:FBgn0037313
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG1161
    Summary
    Predicted to be located in lysosomal membrane. Is expressed in adult head; embryonic/larval midgut; and organism. Orthologous to human TMEM9B (TMEM9 domain family member B) and TMEM9 (transmembrane protein 9). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG1161 in Genome Data Viewer
    Location:
    82F10-82F11; 3-47.5 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (5355092..5356748)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (1180814..1182470)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene mustard Neighboring gene Tim17b1 Neighboring gene uncharacterized protein Neighboring gene Proteasome beta7 subunit Neighboring gene Ceramide kinase

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Protein-DNA interaction mapping using genomic tiling path microarrays in Drosophila. Sun LV, et al. Proc Natl Acad Sci U S A, 2003 Aug 5. PMID 12876199, Free PMC Article
    2. The bHLH Transcription Factor Hand Regulates the Expression of Genes Critical to Heart and Muscle Function in Drosophila melanogaster. Hallier B, et al. PLoS One, 2015. PMID 26252215, Free PMC Article
    3. A protein complex network of Drosophila melanogaster. Guruharsha KG, et al. Cell, 2011 Oct 28. PMID 22036573, Free PMC Article
    4. Next-generation large-scale binary protein interaction network for Drosophila melanogaster. Tang HW, et al. Nat Commun, 2023 Apr 15. PMID 37061542, Free PMC Article
    5. Genome-wide phenotypic RNAi screen in the Drosophila wing: phenotypic description of functional classes. López-Varea A, et al. G3 (Bethesda), 2021 Dec 8. PMID 34599810, Free PMC Article

    See all (23) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Component Evidence Code Pubs
    located_in lysosomal membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG1161-PA
    CG1161-PC

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      5355092..5356748
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001014606.2 → NP_001014606.2  uncharacterized protein Dmel_CG1161, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001014606.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q59E06
      Conserved Domains (1) summary
      pfam05434
      Location:97 → 177
      Tmemb_9; TMEM9

    2. NM_141271.3 → NP_649528.2  uncharacterized protein Dmel_CG1161, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_649528.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9VNA4
      UniProtKB/TrEMBL
      G4LU11, Q8SXE9
      Related
      FBpp0078431
      Conserved Domains (1) summary
      pfam05434
      Location:97 → 226
      Tmemb_9; TMEM9
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q59E06 Q59E06
    Q8SXE9 Q8SXE9
    Q9VNA4.1 Q9VNA4

    Gene LinkOut

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