U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Reg-2 Rhythmically expressed gene 2 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 38075, updated on 9-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    Reg-2provided by FlyBase
    Official Full Name
    Rhythmically expressed gene 2provided by FlyBase
    Primary source
    FLYBASE:FBgn0016715
    Locus tag
    Dmel_CG3200
    See related
    AllianceGenome:FB:FBgn0016715
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    21483246; CG3200; Dmel\CG3200; Dreg-2
    Summary
    Predicted to be active in nucleus. Is expressed in several structures, including adult head; adult heart; dorsal pharyngeal muscle primordium; larval muscle cell; and visceral mesoderm derivative. Orthologous to human HDHD3 (haloacid dehalogenase like hydrolase domain containing 3). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See Reg-2 in Genome Data Viewer
    Location:
    61C7-61C7; 3-0.5 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (605165..606569, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (605165..606569, complement)

    Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene Mediator complex subunit 14 Neighboring gene antisense RNA:CR45807 Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:CR44513 Neighboring gene long non-coding RNA:CR42719

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Extent and character of circadian gene expression in Drosophila melanogaster: identification of twenty oscillating mRNAs in the fly head. Van Gelder RN, et al. Curr Biol, 1995 Dec 1. PMID 8749395
    2. Dynamic de novo adipose tissue development during metamorphosis in Drosophila melanogaster. Tsuyama T, et al. Development, 2023 May 15. PMID 37092314
    3. Influence of the period-dependent circadian clock on diurnal, circadian, and aperiodic gene expression in Drosophila melanogaster. Lin Y, et al. Proc Natl Acad Sci U S A, 2002 Jul 9. PMID 12089325, Free PMC Article
    4. The bantam gene regulates Drosophila growth. Hipfner DR, et al. Genetics, 2002 Aug. PMID 12196398, Free PMC Article
    5. A new genetic locus controlling growth and proliferation in Drosophila melanogaster. Raisin S, et al. Genetics, 2003 Jul. PMID 12871911, Free PMC Article

    See all (40) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by FlyBase

    Component Evidence Code Pubs
    located_in mitochondrion ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    located_in nucleolus ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    rhythmically expressed gene 2
    Names
    CG3200-PA
    Reg-2-PA
    drosophila rhythmically expressed gene 2

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.4 Reference assembly

      Range
      605165..606569 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_138199.3 → NP_612043.1  rhythmically expressed gene 2 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_612043.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q94915, Q9W0P6
      UniProtKB/TrEMBL
      Q8MR71
      Related
      FBpp0072460
      Conserved Domains (2) summary
      TIGR02252
      Location:8 → 220
      DREG-2; REG-2-like, HAD superfamily (subfamily IA) hydrolase
      cl21460
      Location:76 → 215
      HAD_like; Haloacid Dehalogenase-like Hydrolases
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8MR71 Q8MR71
    Q94915.1 Q94915

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Chemical Information
    Molecular Biology Databases
    Research Materials
    Tools