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    mbo members only [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 41562, updated on 9-Dec-2024

    Summary

    Official Symbol
    mboprovided by FlyBase
    Official Full Name
    members onlyprovided by FlyBase
    Primary source
    FLYBASE:FBgn0026207
    Locus tag
    Dmel_CG6819
    See related
    AllianceGenome:FB:FBgn0026207
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    1465/07; 1465/7; anon-WO0118547.263; CG6819; Dmel\CG6819; Dnup 88; dNup88; Dnup88; DNup88; l(3)05043; l(3)S146507; Mbo; MBO; nup88; Nup88; NUP88
    Summary
    Enables chromatin binding activity. Involved in antimicrobial humoral response; negative regulation of protein export from nucleus; and protein import into nucleus. Located in chromatin; nuclear envelope; and nucleoplasm. Part of nuclear pore. Is expressed in adult head. Human ortholog(s) of this gene implicated in fetal akinesia deformation sequence syndrome 4. Orthologous to human NUP88 (nucleoporin 88). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See mbo in Genome Data Viewer
    Location:
    87C5-87C5; 3-52 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (12676487..12679052, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (8502209..8504774, complement)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Glycine N-methyltransferase Neighboring gene uncharacterized protein Neighboring gene Cytochrome P450 313a4 Neighboring gene karmoisin

    Genomic regions, transcripts, and products

    Bibliography

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables chromatin binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables structural constituent of nuclear pore IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in antimicrobial humoral response IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in mRNA export from nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in negative regulation of protein export from nucleus IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in protein import into nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in protein import into nucleus IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in ribosomal large subunit export from nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in ribosomal large subunit export from nucleus IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in ribosomal small subunit export from nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in ribosomal small subunit export from nucleus IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in chromatin IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in chromatin IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    located_in nuclear envelope IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in nuclear lumen IDA
    Inferred from Direct Assay
    more info
    PubMed 
    part_of nuclear pore IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of nuclear pore IDA
    Inferred from Direct Assay
    more info
    PubMed 
    part_of nuclear pore ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    located_in nucleoplasm IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    members only
    Names
    CG6819-PA
    mbo-PA

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      12676487..12679052 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_079606.4NP_524330.2  members only [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_524330.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9GYU8, Q9VG41
      Related
      FBpp0082137
      Conserved Domains (1) summary
      pfam10168
      Location:4701
      Nup88; Nuclear pore component