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    CG5274 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 40257, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG5274provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0036987
    Locus tag
    Dmel_CG5274
    See related
    AllianceGenome:FB:FBgn0036987
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG5274
    Summary
    Orthologous to human INTS15 (integrator complex subunit 15). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG5274 in Genome Data Viewer
    Location:
    77C2-77C2; 3-47 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (20426199..20427666, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (20419299..20420766, complement)

    Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene zye Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene Lipoic acid synthase

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Cytoplasmic binding partners of the Integrator endonuclease INTS11 and its paralog CPSF73 are required for their nuclear function. Lin MH, et al. Mol Cell, 2024 Aug 8. PMID 39032490,
    2. A network model of the molecular organization of chromatin in Drosophila. van Bemmel JG, et al. Mol Cell, 2013 Feb 21. PMID 23438860
    3. Drosophila muller f elements maintain a distinct set of genomic properties over 40 million years of evolution. Leung W, et al. G3 (Bethesda), 2015 Mar 4. PMID 25740935, Free PMC Article
    4. Comprehensive Identification and Alternative Splicing of Microexons in Drosophila. Pang TL, et al. Front Genet, 2021. PMID 33859668, Free PMC Article
    5. Genes conserved in bilaterians but jointly lost with Myc during nematode evolution are enriched in cell proliferation and cell migration functions. Erives AJ. Dev Genes Evol, 2015 Sep. PMID 26173873, Free PMC Article

    See all (28) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Component Evidence Code Pubs
    part_of integrator complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    part_of integrator complex IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    is_active_in nucleus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG5274-PA
    CG5274-PB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.4 Reference assembly

      Range
      20426199..20427666 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_168854.2 → NP_730532.1  uncharacterized protein Dmel_CG5274, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_730532.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VPF9
      Related
      FBpp0077889
      Conserved Domains (1) summary
      pfam14964
      Location:14 → 360
      DUF4507; Domain of unknown function (DUF4507)

    2. NM_140965.3 → NP_649222.1  uncharacterized protein Dmel_CG5274, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_649222.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VPF9
      Related
      FBpp0077890
      Conserved Domains (1) summary
      pfam14964
      Location:14 → 360
      DUF4507; Domain of unknown function (DUF4507)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VPF9 Q9VPF9

    Gene LinkOut

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