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    Ir7d Ionotropic receptor 7d [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 7354416, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Ir7dprovided by FlyBase
    Official Full Name
    Ionotropic receptor 7dprovided by FlyBase
    Primary source
    FLYBASE:FBgn0259190
    Locus tag
    Dmel_CG42294
    See related
    AllianceGenome:FB:FBgn0259190
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    7d; CG15327; CG42294; DmelIR7d; Dmel\CG42294; IR7d
    Old locus tag
    Dmel_CG15327
    Summary
    Predicted to enable ligand-gated monoatomic ion channel activity. Predicted to be involved in detection of chemical stimulus. Predicted to be located in membrane. Is expressed in gustatory receptor neuron of terminal organ; larval abdomen; and terminal organ. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See Ir7d in Genome Data Viewer
    Location:
    7C1-7C1; 1-21 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (7876963..7878836, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (7770996..7772869, complement)

    Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene defective chorion Neighboring gene antisense RNA:CR43615 Neighboring gene Ionotropic receptor 7c Neighboring gene Ionotropic receptor 7e Neighboring gene Ionotropic receptor 7f

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A molecular and neuronal basis for amino acid sensing in the Drosophila larva. Croset V, et al. Sci Rep, 2016 Dec 16. PMID 27982028, Free PMC Article
    2. Transcriptional silencing of transposons by Piwi and maelstrom and its impact on chromatin state and gene expression. Sienski G, et al. Cell, 2012 Nov 21. PMID 23159368, Free PMC Article
    3. An expression atlas of variant ionotropic glutamate receptors identifies a molecular basis of carbonation sensing. Sánchez-Alcañiz JA, et al. Nat Commun, 2018 Oct 12. PMID 30315166, Free PMC Article
    4. The Structure and Function of Ionotropic Receptors in Drosophila. Ni L. Front Mol Neurosci, 2020. PMID 33597847, Free PMC Article
    5. Ancient protostome origin of chemosensory ionotropic glutamate receptors and the evolution of insect taste and olfaction. Croset V, et al. PLoS Genet, 2010 Aug 19. PMID 20808886, Free PMC Article

    See all (20) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables ligand-gated monoatomic ion channel activity ISM
    Inferred from Sequence Model
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in detection of chemical stimulus ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane ISM
    Inferred from Sequence Model
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ionotropic receptor 7d
    Names
    CG42294-PA
    Ir7d-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004354.4 Reference assembly

      Range
      7876963..7878836 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001144703.1 → NP_001138175.1  ionotropic receptor 7d [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001138175.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      B7Z0Y1
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    B7Z0Y1 B7Z0Y1

    Gene LinkOut

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