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    CG5180 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 192508, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG5180provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0043457
    Locus tag
    Dmel_CG5180
    See related
    AllianceGenome:FB:FBgn0043457
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    BEST:LD05530; Dmel\CG5180; LD05530
    Summary
    Is expressed in organism; wing hinge primordium; and wing pouch. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG5180 in Genome Data Viewer
    Location:
    92F1-92F1; 3-69 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (20557930..20559760)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (16383652..16385482)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene Signal-transducer and activator of transcription protein at 92E Neighboring gene alternative testis transcripts open reading frame B Neighboring gene Dephosphocoenzyme A carrier Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A gain-of-function screen for genes that affect the development of the Drosophila adult external sensory organ. Abdelilah-Seyfried S, et al. Genetics, 2000 Jun. PMID 10835395, Free PMC Article
    2. Negative genetic correlation between longevity and its hormetic extension by dietary restriction in Drosophila melanogaster. Gomez FH, et al. Biogerontology, 2020 Apr. PMID 31786681
    3. The nucleosome remodeling factor ISWI functionally interacts with an evolutionarily conserved network of cellular factors. Arancio W, et al. Genetics, 2010 May. PMID 20194965, Free PMC Article
    4. A misexpression study examining dorsal thorax formation in Drosophila melanogaster. Peña-Rangel MT, et al. Genetics, 2002 Mar. PMID 11901120, Free PMC Article
    5. Drosophila miR-277 controls branched-chain amino acid catabolism and affects lifespan. Esslinger SM, et al. RNA Biol, 2013 Jun. PMID 23669073, Free PMC Article

    See all (27) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG5180-PB
    CG5180-PC

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      20557930..20559760
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_142635.2 → NP_650892.2  uncharacterized protein Dmel_CG5180, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_650892.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      B7Z0N0, Q8T479, Q9VDL6
      Related
      FBtr0340547
      Conserved Domains (1) summary
      pfam10545
      Location:16 → 100
      MADF_DNA_bdg; Alcohol dehydrogenase transcription factor Myb/SANT-like

    2. NM_001144615.3 → NP_001138087.1  uncharacterized protein Dmel_CG5180, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001138087.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      B7Z0N0, Q8T479, Q9VDL6
      Conserved Domains (1) summary
      pfam10545
      Location:16 → 100
      MADF_DNA_bdg; Alcohol dehydrogenase transcription factor Myb/SANT-like
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    B7Z0N0 B7Z0N0
    Q8T479 Q8T479

    Gene LinkOut

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