U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    pks4 polyketide beta-ketoacyl synthase [ Mycobacterium tuberculosis H37Rv ]

    Gene ID: 886081, updated on 11-Dec-2020

    Summary

    Go to the top of the page Help
    Gene symbol
    pks4
    Gene description
    polyketide beta-ketoacyl synthase
    Locus tag
    Rv1181
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mycobacterium tuberculosis H37Rv (strain: H37Rv, type-material: type strain of Mycobacterium tuberculosis)
    Lineage
    Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Sequence:
    NC_000962.3 (1315234..1319982)

    NC_000962.3Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene polyketide beta-ketoacyl synthase Neighboring gene acyltransferase papA3 Neighboring gene transmembrane transport protein MmpL10

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_000962.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. TubercuList--10 years after. Lew JM, et al. Tuberculosis (Edinb), 2011 Jan. PMID 20980199
    2. Re-annotation of the genome sequence of Mycobacterium tuberculosis H37Rv. Camus JC, et al. Microbiology (Reading), 2002 Oct. PMID 12368430
    3. Deciphering the biology of Mycobacterium tuberculosis from the complete genome sequence. Cole ST, et al. Nature, 1998 Jun 11. PMID 9634230

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

    Go to the top of the page

    General gene information

    Go to the top of the page Help

    Homology

    General protein information

    Go to the top of the page Help
    Preferred Names
    polyketide beta-ketoacyl synthase
    NP_215697.1
    • Rv1180/Rv1181 fusion has been called msl3. The two CDS's may represent separate modules of the polyketide synthase.

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000962.3 Reference assembly

      Range
      1315234..1319982
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_215697.1 polyketide beta-ketoacyl synthase [Mycobacterium tuberculosis H37Rv]

      See identical proteins and their annotated locations for NP_215697.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      A0A089QRB9
      Conserved Domains (4) summary
      smart00823
      Location:1496 → 1574
      PKS_PP; Phosphopantetheine attachment site
      smart00829
      Location:928 → 1218
      PKS_ER; Enoylreductase
      COG3321
      Location:3 → 560
      PksD; Acyl transferase domain in polyketide synthase (PKS) enzymes [Secondary metabolites biosynthesis, transport and catabolism]
      cl25409
      Location:1262 → 1460
      SDR; Short-chain dehydrogenases/reductases (SDR)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases