U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Myh6 myosin, heavy polypeptide 6, cardiac muscle, alpha [ Mus musculus (house mouse) ]

    Gene ID: 17888, updated on 27-Nov-2024

    Summary

    Official Symbol
    Myh6provided by MGI
    Official Full Name
    myosin, heavy polypeptide 6, cardiac muscle, alphaprovided by MGI
    Primary source
    MGI:MGI:97255
    See related
    Ensembl:ENSMUSG00000040752 AllianceGenome:MGI:97255
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Myhca; Myhc-a; alphaMHC; alpha-MHC; A830009F23Rik
    Summary
    Enables microfilament motor activity. Involved in cardiac muscle contraction. Acts upstream of or within several processes, including adult heart development; regulation of heart contraction; and striated muscle cell development. Located in Z disc and stress fiber. Part of myosin complex. Is expressed in several structures, including brown fat; embryo mesenchyme; great vessel of heart; heart; and skeletal musculature. Used to study dilated cardiomyopathy; dilated cardiomyopathy 1EE; and hypertrophic cardiomyopathy 14. Human ortholog(s) of this gene implicated in atrial heart septal defect (multiple); heart conduction disease (multiple); and intrinsic cardiomyopathy (multiple). Orthologous to human MYH6 (myosin heavy chain 6). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Restricted expression toward heart adult (RPKM 1317.1) See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Myh6 in Genome Data Viewer
    Location:
    14 C3; 14 28.01 cM
    Exon count:
    40
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 14 NC_000080.7 (55179378..55205553, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 14 NC_000080.6 (54941921..54968017, complement)

    Chromosome 14 - NC_000080.7Genomic Context describing neighboring genes Neighboring gene interleukin 25 Neighboring gene CKLF-like MARVEL transmembrane domain containing 5 Neighboring gene microRNA 208a Neighboring gene predicted gene, 52092 Neighboring gene myosin heavy chain associated RNA transcript Neighboring gene myosin, heavy polypeptide 7, cardiac muscle, beta Neighboring gene microRNA 208b

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Clone Names

    • MGC118706

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables ATP binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables actin filament binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables actin filament binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables calcium-dependent ATPase activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables calmodulin binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables identical protein binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables microfilament motor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables microfilament motor activity IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    enables microfilament motor activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables protein kinase binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables protein kinase binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables protein-containing complex binding ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    involved_in ATP metabolic process IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in ATP metabolic process ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within actin filament-based movement IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within adult heart development IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in adult heart development ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in atrial cardiac muscle tissue morphogenesis IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in atrial cardiac muscle tissue morphogenesis ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within cardiac muscle cell development IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in cardiac muscle contraction IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within cardiac muscle hypertrophy in response to stress IDA
    Inferred from Direct Assay
    more info
    PubMed 
    acts_upstream_of_or_within in utero embryonic development IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in muscle contraction ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in muscle filament sliding IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in muscle filament sliding ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within myofibril assembly IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within regulation of ATP-dependent activity IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within regulation of blood pressure IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within regulation of heart contraction IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within regulation of heart growth IDA
    Inferred from Direct Assay
    more info
    PubMed 
    acts_upstream_of_or_within regulation of heart rate IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in regulation of heart rate ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within regulation of the force of heart contraction IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in regulation of the force of heart contraction ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within sarcomere organization IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within striated muscle contraction IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in striated muscle contraction ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in ventricular cardiac muscle tissue morphogenesis IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in ventricular cardiac muscle tissue morphogenesis ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within visceral muscle development IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in Z disc IDA
    Inferred from Direct Assay
    more info
    PubMed 
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of muscle myosin complex ISO
    Inferred from Sequence Orthology
    more info
     
    located_in myofibril IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in myofibril ISO
    Inferred from Sequence Orthology
    more info
     
    part_of myosin II complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of myosin complex IDA
    Inferred from Direct Assay
    more info
    PubMed 
    is_active_in myosin filament IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in myosin filament IEA
    Inferred from Electronic Annotation
    more info
     
    located_in stress fiber IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    myosin-6
    Names
    alpha cardiac MHC
    alpha myosin
    cardiomyopathy, hypertrophic 1
    myHC-alpha
    myosin heavy chain 6
    myosin heavy chain, cardiac muscle, adult

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001164171.1NP_001157643.1  myosin-6

      See identical proteins and their annotated locations for NP_001157643.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (1) represents the longer transcript. Both variants encode the same protein.
      Source sequence(s)
      CT025533
      Consensus CDS
      CCDS36927.1
      UniProtKB/Swiss-Prot
      Q02566, Q64258, Q64738
      UniProtKB/TrEMBL
      B2RQQ1, Q2TAW4
      Related
      ENSMUSP00000080538.7, ENSMUST00000081857.14
      Conserved Domains (3) summary
      cd01377
      Location:99768
      MYSc_class_II; class II myosins, motor domain
      pfam01576
      Location:8481925
      Myosin_tail_1; Myosin tail
      pfam02736
      Location:3472
      Myosin_N; Myosin N-terminal SH3-like domain
    2. NM_010856.4NP_034986.1  myosin-6

      See identical proteins and their annotated locations for NP_034986.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Both variants encode the same protein.
      Source sequence(s)
      CT025533
      Consensus CDS
      CCDS36927.1
      UniProtKB/Swiss-Prot
      Q02566, Q64258, Q64738
      UniProtKB/TrEMBL
      B2RQQ1, Q2TAW4
      Related
      ENSMUSP00000154634.2, ENSMUST00000226297.2
      Conserved Domains (3) summary
      cd01377
      Location:99768
      MYSc_class_II; class II myosins, motor domain
      pfam01576
      Location:8481925
      Myosin_tail_1; Myosin tail
      pfam02736
      Location:3472
      Myosin_N; Myosin N-terminal SH3-like domain

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000080.7 Reference GRCm39 C57BL/6J

      Range
      55179378..55205553 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006518678.4XP_006518741.1  myosin-6 isoform X1

      See identical proteins and their annotated locations for XP_006518741.1

      UniProtKB/TrEMBL
      Q2TAW4
      Conserved Domains (3) summary
      cd01377
      Location:99768
      MYSc_class_II; class II myosins, motor domain
      pfam01576
      Location:8481925
      Myosin_tail_1; Myosin tail
      pfam02736
      Location:3472
      Myosin_N; Myosin N-terminal SH3-like domain
    2. XM_006518677.1XP_006518740.1  myosin-6 isoform X1

      See identical proteins and their annotated locations for XP_006518740.1

      UniProtKB/TrEMBL
      Q2TAW4
      Conserved Domains (3) summary
      cd01377
      Location:99768
      MYSc_class_II; class II myosins, motor domain
      pfam01576
      Location:8481925
      Myosin_tail_1; Myosin tail
      pfam02736
      Location:3472
      Myosin_N; Myosin N-terminal SH3-like domain
    3. XM_036158503.1XP_036014396.1  myosin-6 isoform X2

      UniProtKB/Swiss-Prot
      Q02566, Q64258, Q64738
      UniProtKB/TrEMBL
      B2RQQ1, Q2TAW4
      Conserved Domains (3) summary
      cd01377
      Location:99768
      MYSc_class_II; class II myosins, motor domain
      pfam01576
      Location:8481925
      Myosin_tail_1; Myosin tail
      pfam02736
      Location:3472
      Myosin_N; Myosin N-terminal SH3-like domain