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    vapB47 antitoxin VapB47 [ Mycobacterium tuberculosis H37Rv ]

    Gene ID: 887505, updated on 6-Oct-2023

    Summary

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    Gene symbol
    vapB47
    Gene description
    antitoxin VapB47
    Locus tag
    Rv3407
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mycobacterium tuberculosis H37Rv (strain: H37Rv, type-material: type strain of Mycobacterium tuberculosis)
    Lineage
    Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex
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    Genomic context

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    Sequence:
    NC_000962.3 (3826252..3826551)

    NC_000962.3Genomic Context describing neighboring genes Neighboring gene HTH-type transcriptional regulator Neighboring gene dioxygenase Neighboring gene ribonuclease VapC47 Neighboring gene cholesterol oxidase Neighboring gene oxidoreductase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000962.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TubercuList--10 years after. Lew JM, et al. Tuberculosis (Edinb), 2011 Jan. PMID 20980199
    2. Re-annotation of the genome sequence of Mycobacterium tuberculosis H37Rv. Camus JC, et al. Microbiology (Reading), 2002 Oct. PMID 12368430
    3. Deciphering the biology of Mycobacterium tuberculosis from the complete genome sequence. Cole ST, et al. Nature, 1998 Jun 11. PMID 9634230

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    antitoxin VapB47
    NP_217924.1
    • part of toxin-antitoxin (TA) operon with Rv3408

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000962.3 Reference assembly

      Range
      3826252..3826551
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_217924.1 antitoxin VapB47 [Mycobacterium tuberculosis H37Rv]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A2I7WCI5
      Conserved Domains (1) summary
      COG4118
      Location:7 → 90
      Phd; Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressor [Defense mechanisms]
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P9WF23.1

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