U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Cyp17a1 cytochrome P450, family 17, subfamily a, polypeptide 1 [ Mus musculus (house mouse) ]

    Gene ID: 13074, updated on 27-Nov-2024

    Summary

    Official Symbol
    Cyp17a1provided by MGI
    Official Full Name
    cytochrome P450, family 17, subfamily a, polypeptide 1provided by MGI
    Primary source
    MGI:MGI:88586
    See related
    Ensembl:ENSMUSG00000003555 AllianceGenome:MGI:88586
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Cyp17; p450c17
    Summary
    Enables steroid 17-alpha-monooxygenase activity. Involved in androgen biosynthetic process. Acts upstream of or within glucocorticoid biosynthetic process. Located in axon and neuronal cell body. Is active in endoplasmic reticulum membrane. Is expressed in several structures, including adrenal gland; gut; nervous system; reproductive system; and retina layer. Human ortholog(s) of this gene implicated in several diseases, including cholelithiasis; congenital adrenal hyperplasia; gallbladder cancer; osteoporosis; and prostate cancer. Orthologous to human CYP17A1 (cytochrome P450 family 17 subfamily A member 1). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Biased expression in ovary adult (RPKM 93.6), testis adult (RPKM 75.6) and 3 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Cyp17a1 in Genome Data Viewer
    Location:
    19 C3; 19 38.97 cM
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 19 NC_000085.7 (46655604..46661439, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 19 NC_000085.6 (46667165..46673000, complement)

    Chromosome 19 - NC_000085.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer ABC_E319 Neighboring gene WW domain binding protein 1 like Neighboring gene CapStarr-seq enhancer MGSCv37_chr19:46728226-46728566 Neighboring gene predicted gene, 36602 Neighboring gene Cyp17a1 promoter Neighboring gene predicted gene, 41857 Neighboring gene glyceraldehyde-3-phosphate dehydrogenase pseudogene Neighboring gene BLOC-1 related complex subunit 7

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (3) 
    • Targeted (4)  1 citation

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables heme binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables heme binding ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables iron ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables lyase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables steroid 17-alpha-monooxygenase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables steroid 17-alpha-monooxygenase activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables steroid 17-alpha-monooxygenase activity IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    enables steroid 17-alpha-monooxygenase activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables steroid 17-alpha-monooxygenase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Process Evidence Code Pubs
    involved_in androgen biosynthetic process IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in androgen biosynthetic process IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within glucocorticoid biosynthetic process IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in glucocorticoid biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in hormone biosynthetic process IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in hormone biosynthetic process ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in hormone biosynthetic process ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in positive regulation of steroid hormone biosynthetic process ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in progesterone metabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in progesterone metabolic process ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in progesterone metabolic process ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in steroid biosynthetic process ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in steroid metabolic process ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in steroid metabolic process ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Component Evidence Code Pubs
    located_in axon IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in cell projection ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in endoplasmic reticulum IDA
    Inferred from Direct Assay
    more info
    PubMed 
    is_active_in endoplasmic reticulum membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in mitochondrion HDA PubMed 
    located_in neuronal cell body IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in neuronal cell body ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    steroid 17-alpha-hydroxylase/17,20 lyase
    Names
    17-alpha-hydroxyprogesterone aldolase
    CYPXVII
    cytochrome P450 17A1
    cytochrome P450, 17
    cytochrome P450, 17a1
    cytochrome P450-C17
    cytochrome P450c17
    steroid 17-alpha hydroxylase
    steroid 17-alpha-monooxygenase
    NP_031835.3

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_007809.3NP_031835.3  steroid 17-alpha-hydroxylase/17,20 lyase

      See identical proteins and their annotated locations for NP_031835.3

      Status: VALIDATED

      Source sequence(s)
      AK134376, CD552634, M64863
      Consensus CDS
      CCDS29882.1
      UniProtKB/Swiss-Prot
      P27786
      UniProtKB/TrEMBL
      Q3UYU1, Q53YJ1, Q6P200
      Related
      ENSMUSP00000026012.8, ENSMUST00000026012.8
      Conserved Domains (1) summary
      pfam00067
      Location:28492
      p450; Cytochrome P450

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000085.7 Reference GRCm39 C57BL/6J

      Range
      46655604..46661439 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)