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    CG33143 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 37583, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG33143provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0053143
    Locus tag
    Dmel_CG33143
    See related
    AllianceGenome:FB:FBgn0053143
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    33143; CG13509; CG4232; Dmel\CG33143; mdcds_16487
    Summary
    Involved in positive regulation of macroautophagy. Is expressed in spermatozoon. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG33143 in Genome Data Viewer
    Location:
    58F2-58F2; 2-100 cM
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (22614328..22634084)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (18501833..18521589)

    Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene Ribosomal protein S16 Neighboring gene Vacuolar protein sorting 20 Neighboring gene testes of unusual size Neighboring gene uncharacterized protein Neighboring gene Cyclin-dependent kinase 9 Neighboring gene bonsai Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Discovery of high-confidence human protein-coding genes and exons by whole-genome PhyloCSF helps elucidate 118 GWAS loci. Mudge JM, et al. Genome Res, 2019 Dec. PMID 31537640, Free PMC Article
    2. Iditarod, a Drosophila homolog of the Irisin precursor FNDC5, is critical for exercise performance and cardiac autophagy. Cobb T, et al. Proc Natl Acad Sci U S A, 2023 Sep 26. PMID 37722048, Free PMC Article
    3. The mapping of Drosophila melanogaster mutant A.4.4. Bieser K, et al. MicroPubl Biol, 2018 Dec 17. PMID 32550366, Free PMC Article
    4. Transcriptional Programs of Circuit Assembly in the Drosophila Visual System. Kurmangaliyev YZ, et al. Neuron, 2020 Dec 23. PMID 33125872
    5. Genomic mapping of Suppressor of Hairy-wing binding sites in Drosophila. Adryan B, et al. Genome Biol, 2007. PMID 17705839, Free PMC Article

    See all (26) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Iditarod, a Drosophila homolog of the Irisin precursor FNDC5, is critical for exercise performance and cardiac autophagy.
      Title: Iditarod, a Drosophila homolog of the Irisin precursor FNDC5, is critical for exercise performance and cardiac autophagy.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Process Evidence Code Pubs
    involved_in positive regulation of macroautophagy IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in positive regulation of macroautophagy IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG33143-PC
    CG33143-PD
    CG33143-PE
    CG33143-PG

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.4 Reference assembly

      Range
      22614328..22634084
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_176246.2 → NP_788426.1  uncharacterized protein Dmel_CG33143, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_788426.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8MMF1, Q8SWQ8
      Related
      FBpp0071769
      Conserved Domains (2) summary
      cd00063
      Location:19 → 95
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      pfam16066
      Location:167 → 286
      DUF4808; Domain of unknown function (DUF4808)

    2. NM_001382063.1 → NP_001368934.1  uncharacterized protein Dmel_CG33143, isoform G [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9W233
      Conserved Domains (2) summary
      cd00063
      Location:19 → 93
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      pfam16066
      Location:165 → 230
      DUF4808; Domain of unknown function (DUF4808)

    3. NM_001299803.1 → NP_001286732.1  uncharacterized protein Dmel_CG33143, isoform D [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001286732.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0B4LGA0
      Conserved Domains (2) summary
      cd00063
      Location:19 → 93
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      pfam16066
      Location:165 → 323
      DUF4808; Domain of unknown function (DUF4808)

    4. NM_001299804.1 → NP_001286733.1  uncharacterized protein Dmel_CG33143, isoform E [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001286733.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0B4LGC7
      Conserved Domains (2) summary
      cd00063
      Location:19 → 93
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      pfam16066
      Location:165 → 300
      DUF4808; Domain of unknown function (DUF4808)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A0A0B4LGA0 A0A0B4LGA0
    A0A0B4LGC7 A0A0B4LGC7
    Q8SWQ8 Q8SWQ8
    Q95T67 Q95T67
    Q9W233 Q9W233

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Other Literature Sources
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