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    Cad96Cb Cadherin 96Cb [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 43033, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Cad96Cbprovided by FlyBase
    Official Full Name
    Cadherin 96Cbprovided by FlyBase
    Primary source
    FLYBASE:FBgn0039294
    Locus tag
    Dmel_CG13664
    See related
    AllianceGenome:FB:FBgn0039294
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    cad96C; Cad96C; cad96Cb; CG10421; cg13664; CG13664; CT29262; DCad96Cb; Dmel\CG13664
    Summary
    Predicted to enable calcium ion binding activity. Involved in open tracheal system development. Predicted to be active in plasma membrane. Is expressed in spiracular chamber. Orthologous to human PCDHB7 (protocadherin beta 7). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See Cad96Cb in Genome Data Viewer
    Location:
    96C7-96C7; 3-87 cM
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (25224156..25232321, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (21049878..21058043, complement)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene ALG9, alpha-1,2-mannosyltransferase Neighboring gene Sil1 nucleotide exchange factor Neighboring gene Juvenile hormone binding protein 7

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables calcium ion binding ISM
    Inferred from Sequence Model
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    involved_in cell adhesion IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in cell-cell adhesion mediated by cadherin ISM
    Inferred from Sequence Model
    more info
    		 PubMed 
    involved_in homophilic cell adhesion via plasma membrane adhesion molecules IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in open tracheal system development IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    Component Evidence Code Pubs
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in plasma membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cadherin 96Cb
    Names
    CG13664-PB
    CG13664-PC
    CG13664-PD
    Cad96Cb-PB
    Cad96Cb-PC
    Cad96Cb-PD

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      25224156..25232321 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001170256.1 → NP_001163727.1  cadherin 96Cb, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001163727.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      C6SUV2
      Conserved Domains (1) summary
      cd11304
      Location:145 → 244
      Cadherin_repeat; Cadherin tandem repeat domain

    2. NM_001300595.1 → NP_001287524.1  cadherin 96Cb, isoform D [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001287524.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0B4LHM7
      Conserved Domains (1) summary
      cd11304
      Location:145 → 244
      Cadherin_repeat; Cadherin tandem repeat domain

    3. NM_143098.4 → NP_651355.3  cadherin 96Cb, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_651355.3

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VBV6
      Conserved Domains (1) summary
      cd11304
      Location:145 → 244
      Cadherin_repeat; Cadherin tandem repeat domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A0A0B4LHM7 A0A0B4LHM7
    C6SUV2 C6SUV2
    Q9VBV6 Q9VBV6

    Gene LinkOut

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