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    CG17005 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 34249, updated on 18-Sep-2024

    Summary

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    Official Symbol
    CG17005provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0032109
    Locus tag
    Dmel_CG17005
    See related
    AllianceGenome:FB:FBgn0032109
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG17005
    Orthologs
    all
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    Genomic context

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    See CG17005 in Genome Data Viewer
    Location:
    30A8-30A8; 2-35 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (9327744..9330332)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (9327744..9330332)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR45456 Neighboring gene long non-coding RNA:CR45457 Neighboring gene Cyclin-dependent kinase subunit 30A Neighboring gene Excitatory amino acid transporter 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Australin: a chromosomal passenger protein required specifically for Drosophila melanogaster male meiosis. Gao S, et al. J Cell Biol, 2008 Feb 11. PMID 18268101, Free PMC Article
    2. A Drosophila model of the neurodegenerative disease SCA17 reveals a role of RBP-J/Su(H) in modulating the pathological outcome. Ren J, et al. Hum Mol Genet, 2011 Sep 1. PMID 21653638, Free PMC Article
    3. Transcriptomic analysis of inbreeding depression in cold-sensitive Drosophila melanogaster shows upregulation of the immune response. Vermeulen CJ, et al. J Evol Biol, 2013 Sep. PMID 23944235
    4. Phylostratigraphic bias creates spurious patterns of genome evolution. Moyers BA, et al. Mol Biol Evol, 2015 Jan. PMID 25312911, Free PMC Article
    5. A genome-wide Drosophila screen for heat nociception identifies α2δ3 as an evolutionarily conserved pain gene. Neely GG, et al. Cell, 2010 Nov 12. PMID 21074052, Free PMC Article

    See all (21) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG17005-PB
    CG17005-PC
    CG17005-PD
    CG17005-PE

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      9327744..9330332
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001273358.1 → NP_001260287.1  uncharacterized protein Dmel_CG17005, isoform E [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001260287.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8T8Z8, Q9VLD1
      Conserved Domains (1) summary
      pfam16050
      Location:443 → 595
      CDC73_N; Paf1 complex subunit CDC73 N-terminal

    2. NM_001273356.1 → NP_001260285.1  uncharacterized protein Dmel_CG17005, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001260285.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      M9PCN2

    3. NM_135436.3 → NP_609280.2  uncharacterized protein Dmel_CG17005, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_609280.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8T8Z8, Q9VLD1
      Conserved Domains (1) summary
      pfam16050
      Location:443 → 595
      CDC73_N; Paf1 complex subunit CDC73 N-terminal

    4. NM_001273357.1 → NP_001260286.1  uncharacterized protein Dmel_CG17005, isoform D [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001260286.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      M9PFC4
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    M9PCN2 M9PCN2
    M9PFC4 M9PFC4
    Q9VLD1 Q9VLD1

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