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    CG31997 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 319064, updated on 17-Dec-2024

    Summary

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    Official Symbol
    CG31997provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0051997
    Locus tag
    Dmel_CG31997
    See related
    AllianceGenome:FB:FBgn0051997
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    BcDNA:RE42475; BEST:GH25016; Dmel\CG31997
    Summary
    Located in cytosol. Is expressed in adult brain cell body rind. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG31997 in Genome Data Viewer
    Location:
    102A4-102A4; 4-0 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 4 NC_004353.4 (154654..156060, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 4 NC_004353.3 (175280..176686, complement)

    Chromosome 4 - NC_004353.4Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR43956 Neighboring gene anne boleyn Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene antisense RNA:CR45198 Neighboring gene ADP ribosylation factor-like 4

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A novel family of single VWC-domain proteins in invertebrates. Sheldon TJ, et al. FEBS Lett, 2007 Nov 13. PMID 18028914
    2. The histone code reader PHD finger protein 7 controls sex-linked disparities in gene expression and malignancy in Drosophila. Molnar C, et al. Sci Adv, 2019 Aug. PMID 31453329, Free PMC Article
    3. Gene transposition as a cause of hybrid sterility in Drosophila. Masly JP, et al. Science, 2006 Sep 8. PMID 16960009
    4. The DrosDel collection: a set of P-element insertions for generating custom chromosomal aberrations in Drosophila melanogaster. Ryder E, et al. Genetics, 2004 Jun. PMID 15238529, Free PMC Article
    5. Genome-wide assessment of AU-rich elements by the AREScore algorithm. Spasic M, et al. PLoS Genet, 2012 Jan. PMID 22242014, Free PMC Article

    See all (38) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in cytosol HDA PubMed 
    located_in extracellular space ISM
    Inferred from Sequence Model
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG31997-PA
    CG31997-PB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004353.4 Reference assembly

      Range
      154654..156060 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001297780.1 → NP_001284709.1  uncharacterized protein Dmel_CG31997, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001284709.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8SYQ4
      Conserved Domains (1) summary
      pfam15430
      Location:60 → 127
      SVWC; Single domain von Willebrand factor type C

    2. NM_166735.3 → NP_726539.1  uncharacterized protein Dmel_CG31997, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_726539.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8SYQ4
      Related
      FBpp0088221
      Conserved Domains (1) summary
      pfam15430
      Location:60 → 127
      SVWC; Single domain von Willebrand factor type C
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8SYQ4 Q8SYQ4

    Gene LinkOut

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