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    CG8620 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 50310, updated on 18-Sep-2024

    Summary

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    Official Symbol
    CG8620provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0040837
    Locus tag
    Dmel_CG8620
    See related
    AllianceGenome:FB:FBgn0040837
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG8620
    Orthologs
    all
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    Genomic context

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    See CG8620 in Genome Data Viewer
    Location:
    65E6-65E6; 3-19 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (7158099..7158874)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (7151199..7151974)

    Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene Acyl-CoA binding protein 2 Neighboring gene melted Neighboring gene cornetto Neighboring gene Down syndrome cell adhesion molecule 2 Neighboring gene long non-coding RNA:CR45410

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. IntS6 and the Integrator phosphatase module tune the efficiency of select premature transcription termination events. Fujiwara R, et al. Mol Cell, 2023 Dec 21. PMID 37995689, Free PMC Article
    2. The Integrator complex cleaves nascent mRNAs to attenuate transcription. Tatomer DC, et al. Genes Dev, 2019 Nov 1. PMID 31530651, Free PMC Article
    3. Drosophila intestinal response to bacterial infection: activation of host defense and stem cell proliferation. Buchon N, et al. Cell Host Microbe, 2009 Feb 19. PMID 19218090
    4. Growth deregulation and interaction with host hemocytes contribute to tumor progression in a Drosophila brain tumor model. Voutyraki C, et al. Proc Natl Acad Sci U S A, 2023 Aug 15. PMID 37549261, Free PMC Article
    5. Single-cell transcriptome maps of myeloid blood cell lineages in Drosophila. Cho B, et al. Nat Commun, 2020 Sep 8. PMID 32900993, Free PMC Article

    See all (23) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG8620-PA
    CG8620-PB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.4 Reference assembly

      Range
      7158099..7158874
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_144196.2 → NP_652453.1  uncharacterized protein Dmel_CG8620, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_652453.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VS26
      Related
      FBpp0076627

    2. NM_001144423.2 → NP_001137895.1  uncharacterized protein Dmel_CG8620, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001137895.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      B7Z0C5
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    B7Z0C5 B7Z0C5
    Q5BIK5 Q5BIK5
    Q9VS26 Q9VS26

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