U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Tmem158 transmembrane protein 158 [ Mus musculus (house mouse) ]

    Gene ID: 72309, updated on 9-Dec-2024

    Summary

    Official Symbol
    Tmem158provided by MGI
    Official Full Name
    transmembrane protein 158provided by MGI
    Primary source
    MGI:MGI:1919559
    See related
    Ensembl:ENSMUSG00000054871 AllianceGenome:MGI:1919559
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Ris1; 2310037P21Rik
    Summary
    Predicted to enable peptide binding activity. Predicted to be located in membrane. Is expressed in several structures, including genitourinary system; immune system; intestine; liver; and neural tube. Orthologous to human TMEM158 (transmembrane protein 158). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Tmem158 in Genome Data Viewer
    Location:
    9 F4; 9 73.92 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 9 NC_000075.7 (123088122..123089854, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 9 NC_000075.6 (123259057..123260789, complement)

    Chromosome 9 - NC_000075.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_25558 Neighboring gene predicted gene, 23323 Neighboring gene CUB domain containing protein 1 Neighboring gene STARR-seq mESC enhancer starr_25559 Neighboring gene STARR-seq mESC enhancer starr_25560 Neighboring gene STARR-seq mESC enhancer starr_25561 Neighboring gene STARR-seq mESC enhancer starr_25562 Neighboring gene sterol carrier protein 2, pseudogene 2 Neighboring gene STARR-seq mESC enhancer starr_25564 Neighboring gene STARR-seq mESC enhancer starr_25565 Neighboring gene STARR-positive B cell enhancer mm9_chr9:123275808-123276108 Neighboring gene leucyl-tRNA synthetase, mitochondrial Neighboring gene predicted gene, 46137

    Genomic regions, transcripts, and products

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (3) 
    • Targeted (2)  1 citation

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    enables peptide binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables peptide binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    transmembrane protein 158
    Names
    40 kDa BINP-binding protein
    BINP binding protein p40BBP
    Ras-induced senescence 1
    brain injury-derived neurotrophic peptide (BINP) binding protein
    p40BBP
    ras-induced senescence protein 1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001002267.2NP_001002267.2  transmembrane protein 158 precursor

      See identical proteins and their annotated locations for NP_001002267.2

      Status: VALIDATED

      Source sequence(s)
      AC134248, AI849320, AK009669, BE631438, W89232
      Consensus CDS
      CCDS23658.1
      UniProtKB/Swiss-Prot
      Q6F5E0
      UniProtKB/TrEMBL
      B2RTM1
      Related
      ENSMUSP00000069161.5, ENSMUST00000068140.6

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000075.7 Reference GRCm39 C57BL/6J

      Range
      123088122..123089854 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)