U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Dbil5 diazepam binding inhibitor-like 5 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 59116, updated on 27-Nov-2024

    Summary

    Official Symbol
    Dbil5provided by RGD
    Official Full Name
    diazepam binding inhibitor-like 5provided by RGD
    Primary source
    RGD:68360
    See related
    EnsemblRapid:ENSRNOG00000072446 AllianceGenome:RGD:68360
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    Elp
    Summary
    Predicted to enable fatty-acyl-CoA binding activity. Involved in spermatogenesis. Predicted to be located in cytoplasm. [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Restricted expression toward (RPKM 2154.1) See more
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Dbil5 in Genome Data Viewer
    Location:
    10q24
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 10 NC_086028.1 (61571774..61572786)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 10 NC_051345.1 (61073538..61074550)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 10 NC_005109.4 (64375926..64376938)

    Chromosome 10 - NC_086028.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103693391 Neighboring gene TLC domain containing 3A Neighboring gene gem (nuclear organelle) associated protein 4 Neighboring gene glyoxalase domain containing 4 Neighboring gene mitochondrial rRNA methyltransferase 3 Neighboring gene nucleoredoxin

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    General gene information

    Markers

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    enables fatty-acyl-CoA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Process Evidence Code Pubs
    involved_in acyl-CoA metabolic process TAS
    Traceable Author Statement
    more info
    PubMed 
    involved_in fatty acid metabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in spermatogenesis IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    diazepam-binding inhibitor-like 5
    Names
    endozepine-like peptide

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_021596.2NP_067607.1  diazepam-binding inhibitor-like 5

      See identical proteins and their annotated locations for NP_067607.1

      Status: PROVISIONAL

      Source sequence(s)
      AF128531
      UniProtKB/Swiss-Prot
      P56702, Q9QUJ9
      UniProtKB/TrEMBL
      A6HGV0
      Related
      ENSRNOP00000105273.1, ENSRNOT00000154289.1
      Conserved Domains (1) summary
      cd00435
      Location:285
      ACBP; Acyl CoA binding protein (ACBP) binds thiol esters of long fatty acids and coenzyme A in a one-to-one binding mode with high specificity and affinity. Acyl-CoAs are important intermediates in fatty lipid synthesis and fatty acid degradation and play a ...

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086028.1 Reference GRCr8

      Range
      61571774..61572786
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)