U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    SPR6 Spr6p [ Saccharomyces cerevisiae S288C ]

    Gene ID: 856851, updated on 9-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    SPR6
    Official Full Name
    Spr6p
    Primary source
    SGD:S000000917
    Locus tag
    YER115C
    See related
    AllianceGenome:SGD:S000000917; FungiDB:YER115C; VEuPathDB:YER115C
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Summary
    Involved in ascospore formation. Located in mitochondrion. [provided by Alliance of Genome Resources, Dec 2024]
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See SPR6 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    1
    Sequence:
    Chromosome: V; NC_001137.3 (394292..394867, complement)

    Chromosome V - NC_001137.3Genomic Context describing neighboring genes Neighboring gene Tmn3p Neighboring gene Boi2p Neighboring gene SUMO-targeted ubiquitin ligase complex subunit SLX8 Neighboring gene ribosomal 60S subunit protein L23B

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_001137.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Functional analysis of the sporulation-specific SPR6 gene of Saccharomyces cerevisiae. Kallal LA, et al. Curr Genet, 1990 Nov. PMID 2253272
    2. Endogenous ribosomal frameshift signals operate as mRNA destabilizing elements through at least two molecular pathways in yeast. Belew AT, et al. Nucleic Acids Res, 2011 Apr. PMID 21109528, Free PMC Article
    3. The conserved histone deacetylase Rpd3 and the DNA binding regulator Ume6 repress BOI1's meiotic transcript isoform during vegetative growth in Saccharomyces cerevisiae. Liu Y, et al. Mol Microbiol, 2015 May. PMID 25708805
    4. Sequestration of mRNAs Modulates the Timing of Translation during Meiosis in Budding Yeast. Jin L, et al. Mol Cell Biol, 2015 Oct. PMID 26217015, Free PMC Article
    5. Reverse recruitment: the Nup84 nuclear pore subcomplex mediates Rap1/Gcr1/Gcr2 transcriptional activation. Menon BB, et al. Proc Natl Acad Sci U S A, 2005 Apr 19. PMID 15817685, Free PMC Article

    See all (23) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in ascospore formation IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    involved_in meiotic cell cycle IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in sporulation resulting in formation of a cellular spore IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in mitochondrion HDA PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    Spr6p
    NP_011040.1
    • hypothetical protein; expressed during sporulation; not required for sporulation, but gene exhibits genetic interactions with other genes required for sporulation

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001137.3 Reference assembly

      Range
      394292..394867 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001179005.1 → NP_011040.1  TPA: Spr6p [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_011040.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      D3DM21, Q01684
      UniProtKB/TrEMBL
      B3LRN1, B5VHP1, C7GS71, C8Z7D2
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q01684.2

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Other Literature Sources
    Molecular Biology Databases
    Research Materials
    Tools