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    CG7290 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 40211, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG7290provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0036949
    Locus tag
    Dmel_CG7290
    See related
    AllianceGenome:FB:FBgn0036949
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG7290
    Summary
    Predicted to enable chitin binding activity. Predicted to be located in extracellular region. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG7290 in Genome Data Viewer
    Location:
    77A2-77A2; 3-47 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (20204309..20206046, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (20197409..20199146, complement)

    Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene obstructor-F Neighboring gene uncharacterized protein Neighboring gene antisense RNA:CR32224 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Temperature, rainfall and wind variables underlie environmental adaptation in natural populations of Drosophila melanogaster. Bogaerts-Márquez M, et al. Mol Ecol, 2021 Feb. PMID 33350518, Free PMC Article
    2. Functional characterization and gene expression profiling of Drosophila melanogaster short dADA2b isoform-containing dSAGA complexes. Pankotai T, et al. BMC Genomics, 2013 Jan 22. PMID 23336284, Free PMC Article
    3. Two subunits specific to the PBAP chromatin remodeling complex have distinct and redundant functions during drosophila development. Carrera I, et al. Mol Cell Biol, 2008 Sep. PMID 18573871, Free PMC Article
    4. Conserved chromosomal clustering of genes governed by chromatin regulators in Drosophila. Blanco E, et al. Genome Biol, 2008. PMID 18783608, Free PMC Article
    5. Protein interaction mapping: a Drosophila case study. Formstecher E, et al. Genome Res, 2005 Mar. PMID 15710747, Free PMC Article

    See all (21) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables chitin binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG7290-PA
    CG7290-PB

    NCBI Reference Sequences (RefSeq)

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    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.4 Reference assembly

      Range
      20204309..20206046 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001275164.1 → NP_001262093.1  uncharacterized protein Dmel_CG7290, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001262093.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8SYE6, Q9VW91
      Conserved Domains (2) summary
      smart00494
      Location:296 → 331
      ChtBD2; Chitin-binding domain type 2
      pfam01607
      Location:32 → 77
      CBM_14; Chitin binding Peritrophin-A domain

    2. NM_140931.3 → NP_649188.1  uncharacterized protein Dmel_CG7290, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_649188.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8SYE6, Q9VW91
      Related
      FBpp0074627
      Conserved Domains (2) summary
      smart00494
      Location:296 → 331
      ChtBD2; Chitin-binding domain type 2
      pfam01607
      Location:32 → 77
      CBM_14; Chitin binding Peritrophin-A domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VW91 Q9VW91

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