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    timeout timeout [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 41615, updated on 9-Dec-2024

    Summary

    Official Symbol
    timeoutprovided by FlyBase
    Official Full Name
    timeoutprovided by FlyBase
    Primary source
    FLYBASE:FBgn0038118
    Locus tag
    Dmel_CG7855
    See related
    AllianceGenome:FB:FBgn0038118
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG14381; CG14382; CG7855; CG8148; Dmel\CG7855; dtim2; tim; Tim-2; tim2; TIM2
    Summary
    Predicted to enable DNA binding activity. Involved in DNA damage checkpoint signaling and entrainment of circadian clock. Predicted to be part of replication fork protection complex. Is expressed in several structures, including CNS glial cell; antennal anlage; ganglia; head epidermis primordium; and synaptic neuropil domain. Human ortholog(s) of this gene implicated in advanced sleep phase syndrome and alcohol use disorder. Orthologous to human TIMELESS (timeless circadian regulator). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See timeout in Genome Data Viewer
    Location:
    87D12-87D14; 3-53 cM
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (13088651..13163876)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (8914373..8989598)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR44967 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:CR46019 Neighboring gene long non-coding RNA:CR45109 Neighboring gene 2mit Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    mobile_element

    • Loc: 13135881-13138000 mobile_element_type = transposon:pogo{}1350

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables DNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Process Evidence Code Pubs
    involved_in DNA damage checkpoint signaling IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in DNA repair IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in DNA replication checkpoint signaling IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in entrainment of circadian clock IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in entrainment of circadian clock IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in replication fork arrest IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    part_of replication fork protection complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    timeout
    Names
    CG7855-PA
    timeless 2
    timeless2
    timeout-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      13088651..13163876
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_079617.3NP_524341.3  timeout [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_524341.3

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8INH7, Q9NG27
      Related
      FBpp0082180, FBtr0082712
      Conserved Domains (2) summary
      pfam05029
      Location:7361217
      TIMELESS_C; Timeless protein C terminal region
      pfam04821
      Location:23281
      TIMELESS; Timeless protein