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    CG11563 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 43735, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG11563provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0039868
    Locus tag
    Dmel_CG11563
    See related
    AllianceGenome:FB:FBgn0039868
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    BcDNA:RE07994; Dmel\CG11563
    Summary
    Predicted to enable RNA binding activity. Predicted to be involved in ribosomal large subunit biogenesis. Predicted to be located in nucleus. Predicted to be active in nucleolus. Orthologous to human NOP16 (NOP16 nucleolar protein). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG11563 in Genome Data Viewer
    Location:
    100D1-100D2; 3-102 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (31737035..31737999)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (27562757..27563721)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene tramtrack Neighboring gene Cleavage stimulation factor 50 kD subunit Neighboring gene eukaryotic translation elongation factor 1 alpha 2 Neighboring gene Tubulin binding cofactor A

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Co-regulated transcriptional networks contribute to natural genetic variation in Drosophila sleep. Harbison ST, et al. Nat Genet, 2009 Mar. PMID 19234472, Free PMC Article
    2. Altered levels of hsromega lncRNAs further enhance Ras signaling during ectopically activated Ras induced R7 differentiation in Drosophila. Ray M, et al. Gene Expr Patterns, 2019 Sep. PMID 31096022
    3. Gene expression following induction of regeneration in Drosophila wing imaginal discs. Expression profile of regenerating wing discs. Blanco E, et al. BMC Dev Biol, 2010 Sep 2. PMID 20813047, Free PMC Article
    4. mRNA-Associated Processes and Their Influence on Exon-Intron Structure in Drosophila melanogaster. Lepennetier G, et al. G3 (Bethesda), 2016 Jun 1. PMID 27172210, Free PMC Article
    5. CRISPR-based modular assembly of a UAS-cDNA/ORF plasmid library for more than 5500 Drosophila genes conserved in humans. Wei P, et al. Genome Res, 2020 Jan. PMID 31722958, Free PMC Article

    See all (21) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables RNA binding ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Process Evidence Code Pubs
    involved_in ribosomal large subunit biogenesis IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in nucleolus IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in nucleus ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG11563-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      31737035..31737999
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_143627.3 → NP_651884.1  uncharacterized protein Dmel_CG11563 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_651884.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8MZ24, Q9V9U9
      Related
      FBpp0085192
      Conserved Domains (1) summary
      pfam09420
      Location:9 → 173
      Nop16; Ribosome biogenesis protein Nop16
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8MZ24 Q8MZ24
    Q9V9U9 Q9V9U9

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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