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    Gm2102 predicted gene 2102 [ Mus musculus (house mouse) ]

    Gene ID: 100039210, updated on 27-Nov-2024

    Summary

    Official Symbol
    Gm2102provided by MGI
    Official Full Name
    predicted gene 2102provided by MGI
    Primary source
    MGI:MGI:3780270
    See related
    AllianceGenome:MGI:3780270
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Expression
    Biased expression in ovary adult (RPKM 1.5), limb E14.5 (RPKM 0.3) and 12 other tissues See more
    Orthologs
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    Genomic context

    See Gm2102 in Genome Data Viewer
    Location:
    1 C4; 1 39.94 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (78191601..78194907, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 NC_000067.6 (78214964..78218270, complement)

    Chromosome 1 - NC_000067.7Genomic Context describing neighboring genes Neighboring gene paired box 3 Neighboring gene Pax3 promoter region Neighboring gene Pax3 enhancer in intron 4 Neighboring gene Pax3 upstream hypaxial enhancer Neighboring gene predicted gene, 33152 Neighboring gene STARR-seq mESC enhancer starr_01424 Neighboring gene STARR-seq mESC enhancer starr_01425 Neighboring gene sphingosine-1-phosphate phosphatase 2 Neighboring gene predicted gene, 51634 Neighboring gene STARR-seq mESC enhancer starr_01426 Neighboring gene proteasome (prosome, macropain) subunit, alpha type 2 pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General protein information

    Preferred Names
    uncharacterized protein LOC100039210

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001378660.1NP_001365589.1  uncharacterized protein LOC100039210

      Status: VALIDATED

      Source sequence(s)
      AC115893
      Conserved Domains (1) summary
      cl17238
      Location:57126
      RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000067.7 Reference GRCm39 C57BL/6J

      Range
      78191601..78194907 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)