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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001302448.2 → NP_001289377.1 E3 ubiquitin-protein ligase RNF10 isoform 1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (1).
- Source sequence(s)
-
AC145070
- Consensus CDS
-
CCDS80381.1
- UniProtKB/TrEMBL
- D3Z1N2, Q3U0W6
- Related
- ENSMUSP00000107726.2, ENSMUST00000112097.8
- Conserved Domains (1) summary
-
- pfam13923
Location:225 → 266
- zf-C3HC4_2; Zinc finger, C3HC4 type (RING finger)
-
NM_001302449.2 → NP_001289378.1 E3 ubiquitin-protein ligase RNF10 isoform 3
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) uses alternate in-frame splice sites in the coding region compared to variant 1. This results in a shorter protein (isoform 3), compared to isoform 1.
- Source sequence(s)
-
AC145070
- Consensus CDS
-
CCDS80380.1
- UniProtKB/TrEMBL
- H7BX06, Q3U0W6
- Related
- ENSMUSP00000041778.9, ENSMUST00000040555.15
- Conserved Domains (1) summary
-
- pfam13923
Location:225 → 266
- zf-C3HC4_2; Zinc finger, C3HC4 type (RING finger)
-
NM_001425510.1 → NP_001412439.1 E3 ubiquitin-protein ligase RNF10 isoform 4
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) uses an alternate in-frame splice site in the coding region compared to variant 1. This results in a shorter protein (isoform 4), compared to isoform 1. Isoforms 2 and 4 are the same length but have different sequences.
- Source sequence(s)
-
AC145070
- UniProtKB/TrEMBL
-
Q3U0W6
-
NM_016698.3 → NP_057907.2 E3 ubiquitin-protein ligase RNF10 isoform 2
See identical proteins and their annotated locations for NP_057907.2
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) uses an alternate in-frame splice site in the coding region compared to variant 1. This results in a shorter protein (isoform 2), compared to isoform 1. Isoforms 2 and 4 are the same length but have different sequences.
- Source sequence(s)
-
AC145070
- Consensus CDS
-
CCDS19584.1
- UniProtKB/Swiss-Prot
- Q3UIW5, Q6PDS8, Q6ZQE8, Q91YZ9, Q9R0P0
- UniProtKB/TrEMBL
-
Q3U0W6
- Related
- ENSMUSP00000107725.3, ENSMUST00000112096.9
- Conserved Domains (1) summary
-
- pfam13923
Location:225 → 266
- zf-C3HC4_2; Zinc finger, C3HC4 type (RING finger)
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000071.7 Reference GRCm39 C57BL/6J
- Range
-
115379829..115410951 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)