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    RpL7 Ribosomal protein L7 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 34352, updated on 9-Dec-2024

    Summary

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    Official Symbol
    RpL7provided by FlyBase
    Official Full Name
    Ribosomal protein L7provided by FlyBase
    Primary source
    FLYBASE:FBgn0005593
    Locus tag
    Dmel_CG4897
    See related
    AllianceGenome:FB:FBgn0005593
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    BEST:GH04411; CG4897; Dmel\CG4897; L30; L7; Rp L7; rpl7; rpL7; RPL7
    Summary
    A structural constituent of ribosome. Involved in pupariation. Located in cytosolic ribosome. Is expressed in adult head; adult heart; and organism. Orthologous to human RPL7 (ribosomal protein L7). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See RpL7 in Genome Data Viewer
    Location:
    31B1-31B1; 2-40 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (10201004..10202321)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (10201004..10202321)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene Sulfonylurea receptor Neighboring gene Fumarase 4 Neighboring gene RPA-interacting protein alpha Neighboring gene uncharacterized protein Neighboring gene Sorting nexin 17

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Transcriptional repression of euchromatic genes by Drosophila heterochromatin protein 1 and histone modifiers. Hwang KK, et al. Proc Natl Acad Sci U S A, 2001 Sep 25. PMID 11562500, Free PMC Article
    2. Secreted peptide Dilp8 coordinates Drosophila tissue growth with developmental timing. Colombani J, et al. Science, 2012 May 4. PMID 22556251
    3. New partners in regulation of gene expression: the enhancer of Trithorax and Polycomb Corto interacts with methylated ribosomal protein l12 via its chromodomain. Coléno-Costes A, et al. PLoS Genet, 2012. PMID 23071455, Free PMC Article
    4. Genome-wide analysis of promoter architecture in Drosophila melanogaster. Hoskins RA, et al. Genome Res, 2011 Feb. PMID 21177961, Free PMC Article
    5. Inter-Organ Growth Coordination Is Mediated by the Xrp1-Dilp8 Axis in Drosophila. Boulan L, et al. Dev Cell, 2019 Jun 3. PMID 31006647

    See all (67) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables RNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables structural constituent of ribosome HDA PubMed 
    enables structural constituent of ribosome IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables structural constituent of ribosome IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables structural constituent of ribosome TAS
    Traceable Author Statement
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cytoplasmic translation IC
    Inferred by Curator
    more info
    		 PubMed 
    involved_in cytoplasmic translation TAS
    Traceable Author Statement
    more info
    		 PubMed 
    involved_in maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in pupariation IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of cytosolic large ribosomal subunit IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    part_of cytosolic large ribosomal subunit TAS
    Traceable Author Statement
    more info
    		 PubMed 
    located_in cytosolic ribosome HDA PubMed 
    located_in cytosolic ribosome IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ribosomal protein L7
    Names
    CG4897-PA
    CG4897-PB
    RpL7-PA
    RpL7-PB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      10201004..10202321
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001298865.1 → NP_001285794.1  ribosomal protein L7, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001285794.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P32100, Q541C8, Q9VL30
      UniProtKB/TrEMBL
      X2J5G6
      Conserved Domains (1) summary
      TIGR01310
      Location:19 → 252
      uL30_euk; 60S ribosomal protein uL30, eukaryotic form

    2. NM_078807.3 → NP_523531.1  ribosomal protein L7, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_523531.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P32100, Q541C8, Q9VL30
      UniProtKB/TrEMBL
      X2J5G6
      Related
      FBpp0079536
      Conserved Domains (1) summary
      TIGR01310
      Location:19 → 252
      uL30_euk; 60S ribosomal protein uL30, eukaryotic form
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P32100.2 P32100
    X2J5G6 X2J5G6

    Gene LinkOut

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