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    CG12645 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 31947, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG12645provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0030181
    Locus tag
    Dmel_CG12645
    See related
    AllianceGenome:FB:FBgn0030181
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG12645
    Summary
    Predicted to enable zinc ion binding activity. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG12645 in Genome Data Viewer
    Location:
    9B2-9B2; 1-31 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (10153612..10155009)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (10047645..10049042)

    Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene NAD(P)HX epimerase Neighboring gene RhoU Neighboring gene antisense RNA:CR44894 Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:CR32690

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Transient junction anisotropies orient annular cell polarization in the Drosophila airway tubes. Hosono C, et al. Nat Cell Biol, 2015 Dec. PMID 26551273
    2. A protein interaction map of Drosophila melanogaster. Giot L, et al. Science, 2003 Dec 5. PMID 14605208
    3. A genome-wide Drosophila screen for heat nociception identifies α2δ3 as an evolutionarily conserved pain gene. Neely GG, et al. Cell, 2010 Nov 12. PMID 21074052, Free PMC Article
    4. Systematic genetic analysis of muscle morphogenesis and function in Drosophila. Schnorrer F, et al. Nature, 2010 Mar 11. PMID 20220848
    5. High-fidelity promoter profiling reveals widespread alternative promoter usage and transposon-driven developmental gene expression. Batut P, et al. Genome Res, 2013 Jan. PMID 22936248, Free PMC Article

    See all (19) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables zinc ion binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG12645-PB
    CG12645-PC

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004354.4 Reference assembly

      Range
      10153612..10155009
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001103465.2 → NP_001096935.1  uncharacterized protein Dmel_CG12645, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001096935.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A8JUP5
      Conserved Domains (1) summary
      pfam10601
      Location:129 → 193
      zf-LITAF-like; LITAF-like zinc ribbon domain

    2. NM_001272464.1 → NP_001259393.1  uncharacterized protein Dmel_CG12645, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001259393.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      M9PJG3
      Conserved Domains (1) summary
      pfam10601
      Location:125 → 189
      zf-LITAF-like; LITAF-like zinc ribbon domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A8JUP5 A8JUP5
    M9PJG3 M9PJG3

    Gene LinkOut

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