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    4933416E03Rik RIKEN cDNA 4933416E03 gene [ Mus musculus (house mouse) ]

    Gene ID: 71081, updated on 17-Aug-2024

    Summary

    Official Symbol
    4933416E03Rikprovided by MGI
    Official Full Name
    RIKEN cDNA 4933416E03 geneprovided by MGI
    Primary source
    MGI:MGI:1918331
    See related
    Ensembl:ENSMUSG00000085198 AllianceGenome:MGI:1918331
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Expression
    Restricted expression toward testis adult (RPKM 1.4) See more
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    Genomic context

    See 4933416E03Rik in Genome Data Viewer
    Location:
    2 H2; 2 80.59 cM
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (159789261..159823209)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (159947341..159981289)

    Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene mitochondrial ribosomal protein L11 pseudogene Neighboring gene sodium channel, voltage-gated, type VII, alpha pseudogene Neighboring gene STARR-seq mESC enhancer starr_06249 Neighboring gene STARR-seq mESC enhancer starr_06250 Neighboring gene STARR-seq mESC enhancer starr_06251 Neighboring gene RIKEN cDNA 9130015L21 gene Neighboring gene STARR-seq mESC enhancer starr_06252 Neighboring gene STARR-seq mESC enhancer starr_06253 Neighboring gene STARR-seq mESC enhancer starr_06254 Neighboring gene predicted gene, 34741

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Gene Ontology Provided by MGI

    Component Evidence Code Pubs
    is_active_in cellular_component  

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_040498.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AK016829, AL672162
      Related
      ENSMUST00000133091.2

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000068.8 Reference GRCm39 C57BL/6J

      Range
      159789261..159823209
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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