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    Ugcg UDP-glucose ceramide glucosyltransferase [ Mus musculus (house mouse) ]

    Gene ID: 22234, updated on 9-Dec-2024

    Summary

    Official Symbol
    Ugcgprovided by MGI
    Official Full Name
    UDP-glucose ceramide glucosyltransferaseprovided by MGI
    Primary source
    MGI:MGI:1332243
    See related
    Ensembl:ENSMUSG00000028381 AllianceGenome:MGI:1332243
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Ugcgl; Epcs21; GlcT-1
    Summary
    Enables ceramide glucosyltransferase activity. Involved in several processes, including cornified envelope assembly; establishment of skin barrier; and glucosylceramide biosynthetic process. Predicted to be located in Golgi membrane. Predicted to be active in membrane. Is expressed in several structures, including blastocyst; brain; early embryo; liver; and oocyte. Orthologous to human UGCG (UDP-glucose ceramide glucosyltransferase). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Ubiquitous expression in CNS E18 (RPKM 20.2), whole brain E14.5 (RPKM 18.2) and 28 other tissues See more
    Orthologs
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    Genomic context

    See Ugcg in Genome Data Viewer
    Location:
    4 32.44 cM; 4 B3
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (59189452..59222833)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (59189507..59222833)

    Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene shortage in chiasmata 1 Neighboring gene predicted gene, 35527 Neighboring gene ribosomal protein SA, pseudogene 11 Neighboring gene STARR-seq mESC enhancer starr_10368 Neighboring gene STARR-seq mESC enhancer starr_10369 Neighboring gene STARR-positive B cell enhancer mm9_chr4:59212266-59212567 Neighboring gene CapStarr-seq enhancer MGSCv37_chr4:59218694-59218997 Neighboring gene CapStarr-seq enhancer MGSCv37_chr4:59219045-59219154 Neighboring gene STARR-seq mESC enhancer starr_10370 Neighboring gene STARR-positive B cell enhancer ABC_E1031 Neighboring gene STARR-positive B cell enhancer ABC_E9084 Neighboring gene CapStarr-seq enhancer MGSCv37_chr4:59274266-59274419 Neighboring gene STARR-seq mESC enhancer starr_10371 Neighboring gene STARR-positive B cell enhancer mm9_chr4:59288450-59288750 Neighboring gene predicted gene 12596 Neighboring gene predicted gene, 35578

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (3) 
    • Targeted (6)  1 citation

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables ceramide glucosyltransferase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables ceramide glucosyltransferase activity IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    enables ceramide glucosyltransferase activity ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    located_in Golgi membrane ISO
    Inferred from Sequence Orthology
    more info
     
    located_in Golgi membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    is_active_in membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in membrane ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    ceramide glucosyltransferase
    Names
    GCS
    UDP-glucose:N-acylsphingosine D-glucosyltransferase
    ectoplacental cone, invasive trophoblast giant cells, extraembryonic ectoderm and chorion sequence 21
    glucosylceramide synthase
    glycosylceramide synthase
    NP_035803.1
    XP_006537848.1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_011673.3NP_035803.1  ceramide glucosyltransferase

      See identical proteins and their annotated locations for NP_035803.1

      Status: PROVISIONAL

      Source sequence(s)
      AL808112
      Consensus CDS
      CCDS18219.1
      UniProtKB/Swiss-Prot
      A2AN90, O88693
      Related
      ENSMUSP00000030074.8, ENSMUST00000030074.8
      Conserved Domains (1) summary
      cd02520
      Location:51280
      Glucosylceramide_synthase; Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000070.7 Reference GRCm39 C57BL/6J

      Range
      59189452..59222833
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006537785.5XP_006537848.1  ceramide glucosyltransferase isoform X1

      Conserved Domains (1) summary
      cd02520
      Location:51284
      Glucosylceramide_synthase; Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis