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    LOC101928255 uncharacterized LOC101928255 [ Homo sapiens (human) ]

    Gene ID: 101928255, updated on 10-Dec-2024

    Summary

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    Gene symbol
    LOC101928255
    Gene description
    uncharacterized LOC101928255
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

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    See LOC101928255 in Genome Data Viewer
    Location:
    21q22.3
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 21 NC_000021.9 (42647159..42653658, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 21 NC_060945.1 (41035599..41042108, complement)

    Chromosome 21 - NC_000021.9Genomic Context describing neighboring genes Neighboring gene solute carrier family 37 member 1 Neighboring gene uncharacterized LOC101928212 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 13349 Neighboring gene VISTA enhancer hs2248 Neighboring gene MPRA-validated peak4415 silencer Neighboring gene long intergenic non-protein coding RNA 1671 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr21:44037913-44038824 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr21:44057507-44058403 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr21:44072695-44073416 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 18529 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr21:44081521-44082390 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr21:44086147-44086653 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr21:44088149-44089095 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr21:44089096-44090041 Neighboring gene phosphodiesterase 9A Neighboring gene H3K4me1 hESC enhancer GRCh37_chr21:44122945-44123824 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr21:44126986-44127486 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr21:44144061-44145260 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr21:44158941-44159941 Neighboring gene PDE9A antisense RNA 1 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr21:44176879-44177378 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr21:44181049-44181582 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr21:44181583-44182114 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr21:44187499-44187998 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr21:44191023-44191524 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr21:44195549-44196050 Neighboring gene uncharacterized LOC107985504

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Tissue-specific circular RNA induction during human fetal development
    • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
    • BioProject: PRJNA270632
    • Publication: PMID 26076956
    • Analysis date: Mon Apr 2 22:54:59 2018

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    See Variation Viewer (GRCh38)

    General gene information

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    Clone Names

    • AP001626.2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000021.9 Reference GRCh38.p14 Primary Assembly

      Range
      42647159..42653658 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_244322.4 RNA Sequence

    2. XR_007067879.1 RNA Sequence

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060945.1 Alternate T2T-CHM13v2.0

      Range
      41035599..41042108 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_007090199.1 RNA Sequence

    2. XR_007090200.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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