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    LOC100996385 uncharacterized LOC100996385 [ Homo sapiens (human) ]

    Gene ID: 100996385, updated on 10-Dec-2024

    Summary

    Gene symbol
    LOC100996385
    Gene description
    uncharacterized LOC100996385
    See related
    Ensembl:ENSG00000248469
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Biased expression in brain (RPKM 2.2), testis (RPKM 1.5) and 6 other tissues See more
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    Genomic context

    See LOC100996385 in Genome Data Viewer
    Location:
    5q35.2
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 5 NC_000005.10 (176049678..176062055, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 5 NC_060929.1 (176593105..176605716, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 5 NC_000005.9 (175476681..175489058, complement)

    Chromosome 5 - NC_000005.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124900194 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr5:175437253-175437753 Neighboring gene olfactory receptor family 1 subfamily X member 1 pseudogene Neighboring gene protein FAM83G-like Neighboring gene H3K4me1 hESC enhancer GRCh37_chr5:175471779-175472279 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr5:175478652-175479152 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr5:175479153-175479653 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr5:175491282-175491899 Neighboring gene protein FAM153B Neighboring gene PLCR-B recombination region Neighboring gene uncharacterized LOC107986487 Neighboring gene selenophosphate synthetase 1 pseudogene 3

    Genomic regions, transcripts, and products

    Expression

    • Project title: Tissue-specific circular RNA induction during human fetal development
    • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
    • BioProject: PRJNA270632
    • Publication: PMID 26076956
    • Analysis date: Mon Apr 2 22:54:59 2018

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_103794.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      BC042064, HY139400
      Related
      ENST00000512675.2

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000005.10 Reference GRCh38.p14 Primary Assembly

      Range
      176049678..176062055 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060929.1 Alternate T2T-CHM13v2.0

      Range
      176593105..176605716 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)