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    Zfp706 zinc finger protein 706 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 500855, updated on 27-Nov-2024

    Summary

    Official Symbol
    Zfp706provided by RGD
    Official Full Name
    zinc finger protein 706provided by RGD
    Primary source
    RGD:1563959
    See related
    EnsemblRapid:ENSRNOG00000060956 AllianceGenome:RGD:1563959
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    Znf706
    Summary
    Predicted to be involved in negative regulation of DNA-templated transcription and negative regulation of stem cell population maintenance. Predicted to be located in cytoplasm and nucleus. Orthologous to human ZNF706 (zinc finger protein 706). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Biased expression in Adrenal (RPKM 190.9), Kidney (RPKM 180.1) and 9 other tissues See more
    Orthologs
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    Genomic context

    See Zfp706 in Genome Data Viewer
    Location:
    7q22
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 7 NC_086025.1 (70050960..70059588, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 7 NC_051342.1 (68167496..68174121, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 7 NC_005106.4 (75803310..75809853, complement)

    Chromosome 7 - NC_086025.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134479712 Neighboring gene tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta Neighboring gene uncharacterized LOC100910524 Neighboring gene uncharacterized LOC134479896 Neighboring gene ferritin light chain 1, pseudogene 7

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001394374.1NP_001381303.1  zinc finger protein 706

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000007
      UniProtKB/TrEMBL
      A6HR39
      Related
      ENSRNOP00000071758.3, ENSRNOT00000084114.3
      Conserved Domains (1) summary
      pfam18658
      Location:4165
      zf-C2H2_12; Zinc-finger C2H2-type

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086025.1 Reference GRCr8

      Range
      70050960..70059588 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_063264113.1XP_063120183.1  zinc finger protein 706 isoform X1

      UniProtKB/TrEMBL
      A6HR39

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_001126087.1: Suppressed sequence

      Description
      NM_001126087.1: This RefSeq was removed because it is a nonsense-mediated mRNA decay (NMD) candidate.